Gene Tery_0186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0186 
Symbol 
ID4242937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp277765 
End bp279303 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content31% 
IMG OID638105532 
Producthypothetical protein 
Protein accessionYP_720150 
Protein GI113474089 
COG category[R] General function prediction only 
COG ID[COG2251] Predicted nuclease (RecB family) 
TIGRFAM ID[TIGR03491] RecB family nuclease, putative, TM0106 family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.12716 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTATCA CTGACTCTCA GCTACTTTCT TATCAACGCT GTTCTAGAAA AGTATTTTTA 
GATGTTTATG GAGATTTTAG ACAACAAGAA TCTCCTAGTG ATTTTCGACT GAAATTAATT
AAAGATAGTT CTGCATTTAG GTCTAGTATA GTCGGTAATT ATAATTATCA AAAACCGGAT
TATCCTCAGG GAAATTTTAT TGCTGGGGCA AAAGCTACAA AACTATTAAT GGCATCAGGT
GTTGATGTGA TTTATCAGGG AGTATTAATG ATTCAGAAAT CTGCCATAGA ATCATCCCTA
GAAAATCAAG TTCAGACAGA TAATTTTCTA TCGACTAATT TTGTTAGCTA TCCAGATTTA
TTAATTAAAT ATCCTGGTTC TTCTAGCTTC GGGAATTGGA TTTATATTCC CACGGATATT
AAATTAAGTA AACGTCCGAA ATTAGAATAT CAAATAGTTA CTACTTTCCA TGCTCAAATA
TTAGCTAGCA TTCAAAAAAC TTGGCCAGAA TTTGCTTATT TAATTCTCCG AAATAAAGGA
TTATACAAAG TTAATTTACA ACAGAGAATT CAGGCAATGC AGCAAGCTAT TTCTGAGTTA
ATTTTTATGT TGCAAAATTC TCTAGAACCA GAAGTTTTTA TCTCTCGTCA AAAATGTAGT
CTTTGTGCTT GGTATAATAC CTGTCATGCT GTTGCTAAAA CTGAAAAACA TTTATCTCTT
TTACCAGGAG TTACCTCTAA TAGATATGCT GTTTTGAAGA GATTGAATTT AACAACTTTA
GAATCTTTAA GTCAAACGAA TCCTAATGAT TTAGAAAGTT ACCCAGAATT TGCTGATGGA
GTCGCAATAG AAGTTGTGCA ACAAGCTCAA TCAGTACGAG AAAATAAAGT TATTTTAAGA
AATGAAAAAT TCACAAAACA ACTAGAGATT CCAGCTTTAT CAATTACTGA TTATAAATTA
ACTAAGTTAG TAAATGCTCC TGTTGAATTG TACTTTGATA TTGAGGCTCA ACCAGAAATT
AATTTGGATT ATTTACATGG TGTTTTAGTA GTTAATAAAC GTTACAATAC AGAAAAATTT
TATGTTCATT TAGCAGAAAA TCCTTTAGAT GAAGAATTGA TTTGGCATCA ATTTTTAGAC
TTAGTTTGGA AGTATCCTAT CGCTCCAATT TATCACTTCT GTGAATATGA AATTCAAACT
GTCAAAAAAT TAGCTAAACT CTATAATACT CCAACATATA AGTGGAAACC ATTGTTGAAA
AGATTTGTGG ATATTCATAA AATTATTACT CAAACTATTA CACTACCTAT AGAAAGCTAT
GCCTTGAAAA ATATTGCCCG TTGGTTAGGT TTTGAATGGC GAAATCCTGA AGCTAATGGC
GCTCAATCTG TTTGCTGGTA TGATCAATGG TTAGCAACAG GCGATCGCTC TTTATTAGAC
GCAATTATTA TTTACAATGA AGATGATTGT TATGCTACTT ATTATGTTAA AGAATGGTTG
TCAAAATTTT TAGAACAGGA ACTAGGAAAT AGGAAGTAA
 
Protein sequence
MFITDSQLLS YQRCSRKVFL DVYGDFRQQE SPSDFRLKLI KDSSAFRSSI VGNYNYQKPD 
YPQGNFIAGA KATKLLMASG VDVIYQGVLM IQKSAIESSL ENQVQTDNFL STNFVSYPDL
LIKYPGSSSF GNWIYIPTDI KLSKRPKLEY QIVTTFHAQI LASIQKTWPE FAYLILRNKG
LYKVNLQQRI QAMQQAISEL IFMLQNSLEP EVFISRQKCS LCAWYNTCHA VAKTEKHLSL
LPGVTSNRYA VLKRLNLTTL ESLSQTNPND LESYPEFADG VAIEVVQQAQ SVRENKVILR
NEKFTKQLEI PALSITDYKL TKLVNAPVEL YFDIEAQPEI NLDYLHGVLV VNKRYNTEKF
YVHLAENPLD EELIWHQFLD LVWKYPIAPI YHFCEYEIQT VKKLAKLYNT PTYKWKPLLK
RFVDIHKIIT QTITLPIESY ALKNIARWLG FEWRNPEANG AQSVCWYDQW LATGDRSLLD
AIIIYNEDDC YATYYVKEWL SKFLEQELGN RK