Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0185 |
Symbol | |
ID | 4242936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 275667 |
End bp | 276845 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638105531 |
Product | aminotransferase, class V |
Protein accession | YP_720149 |
Protein GI | 113474088 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.119153 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCAGA AGATTTCTCA ATTGTCAAGT TATCGACAAA ACTTTCCGGC TTTAGCTAAT AAAAATTATT TTAATTATGG TGGTCAAGGA CCTATGCCTA AAATATCTTT AGAGGCAATT TATGATTCTT ATCAAAAAGT ACAAAATTTC GGACCTTTTT CTGGAAAAAT TGGTAAGTGG GTGGTTAATG AAGCAGCTTT AATGCGAAGA GCGATCGCTA CTGAGTTAGG AGTTTCTCCA GATACTATTG CTTTGACACC AAATGTTACT GTAGGTTGTA ATATTTCACT TTGGGGTTTA AATTGGCAGG AGGGAGATCA TATCTTACTT TCTGACTGTG AACATCCGGG AATTATTGCT ACAATTAAGG AGATTCAAAG ACGTTTTAAT ATAGAGGTTT CTACTTGTCC AATAATGGAA ACCTTGAATA AAGGAAACCC TGTAACAGTA ATTAAAGAAA ATTTACGTCA GAATACAAAG TTATTGGTAA TCAGTCATAT TTTGTGGAAT ACAGGTCAGG TTTTACCATT AACTGAAATT GTTAAATTGT GCCATTCTTT ATTTAAATCT CCAATTAAAG TTTTAGCTGA TGCTGCTCAA TCTGTAGGAG TTTTACCTTT ACAATTAGCA GAAACAGAGG TAGATTTTTA TGCTTTTACT GGTCATAAAT GGTGGTGCGG ACCAGAAGGT TTAGGGGGAC TTTATGTAAG TCCTAAAGTT AGGGAAAGTT TAATTCCTAC TTTTATTGGT TTGGGGAGTA TTTTGAGAGA TAAAGTTGAT CAAATAATTG GCTGGAAACC TGATGGTAGA CGTTATGAAG TTTCTACTTC TGCTTATCCT TTATATTCTG GTTTAAGGCA AGCAATAAGT CTACATAATC AATGGGGAAA TGCAATAGAA AGGTATGATA GAATTCAAAG GTTAAGTAAA TATTTATGGG ATAATTTAAT CAAAATTCCT GAAGTTAAAT GTTTATCCAC ATCACCGCCA GAAGCTGGAT TAGTTTCTTT TCAAGTAACT AATGGTAAAT CACATCAAGA GTTAGTGAAT TTTTTAGAAA ACCAGGATAT TATGGTGCGA ACTATTATTA ACCCAGATTG TGTGAGAGCT TCTATTCATT ATTTTAGTTT AGAGGCAGAA ATTGATAAAT TAGTTGCAGA AATTAAAGCT TTTATTTGA
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Protein sequence | MDQKISQLSS YRQNFPALAN KNYFNYGGQG PMPKISLEAI YDSYQKVQNF GPFSGKIGKW VVNEAALMRR AIATELGVSP DTIALTPNVT VGCNISLWGL NWQEGDHILL SDCEHPGIIA TIKEIQRRFN IEVSTCPIME TLNKGNPVTV IKENLRQNTK LLVISHILWN TGQVLPLTEI VKLCHSLFKS PIKVLADAAQ SVGVLPLQLA ETEVDFYAFT GHKWWCGPEG LGGLYVSPKV RESLIPTFIG LGSILRDKVD QIIGWKPDGR RYEVSTSAYP LYSGLRQAIS LHNQWGNAIE RYDRIQRLSK YLWDNLIKIP EVKCLSTSPP EAGLVSFQVT NGKSHQELVN FLENQDIMVR TIINPDCVRA SIHYFSLEAE IDKLVAEIKA FI
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