| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0179 |
|---|
| Symbol | |
|---|
| ID | 4242929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 266150 |
|---|
| End bp | 266914 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638105525 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_720144 |
|---|
| Protein GI | 113474083 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1943] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0565655 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.576766 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAGAA AACCACGTCA ACTTTTGCCT CAATATTCCG ATCATGTTAC TTGTCGTTGC
AACAACCGAG AGTTTCGTTT GACTCGTCTC CAATGTCGTC AGGTTTTTTT GTTTGCCTTA
AAAAAAGCTT TGGATAAGTT TGGCTTTAAA CTTTATGCTC TATGCATTAT GAGTAACCAT
ATTCATTATT TACTAGAGCC ATCCATTCGG GAAGACTTAC CGAAAATTAT GCACTGGTTA
AACTGGTATA CGGCTATGTG TTTTAATCAA ATGCTTAACC GTACCGGGCA TTTTTGGGAG
AAGAGATACC ATAGTACCGG GTTTGAAAAT ACTGATAAAA AACGAGCTTT GAATACTCTT
CGCTATATTC ACGCTAACCC AAAAGCAGCT AATATGCAGT CTGGGTTTTT CTATGACTTT
TCTAACTATG GCACTTATGA CCGCCTCACT GATGATGGTC TCACAAAGTG GCATCCTGCT
TTTTTGTCTC TGGGAAAAAC TCTTGATGAA TGTGCTAAAA ACTATAGGAA ATTTTGTCAC
AAATACAAAC CTCGACCAAA ACCGGAAAAG CGTAGTCGTT GGGGTAGTAG GTTTTTGCCT
AAGGTGAAAA AAAAGAAAAA GAATAAGGTT TCTCCAGGAC AAATGCGACT TCCTTGGGCA
GACTGGGAAC CTCCCTCAAA TTTGGTGGCG GAGGTAGCCA GGCAGTTTGT TTTGGCAAAT
TGTTATGACC CGGAGGCGGC TATGAAATTT TTCGATGATC AGTAA
|
|---|
| Protein sequence | MPRKPRQLLP QYSDHVTCRC NNREFRLTRL QCRQVFLFAL KKALDKFGFK LYALCIMSNH
IHYLLEPSIR EDLPKIMHWL NWYTAMCFNQ MLNRTGHFWE KRYHSTGFEN TDKKRALNTL
RYIHANPKAA NMQSGFFYDF SNYGTYDRLT DDGLTKWHPA FLSLGKTLDE CAKNYRKFCH
KYKPRPKPEK RSRWGSRFLP KVKKKKKNKV SPGQMRLPWA DWEPPSNLVA EVARQFVLAN
CYDPEAAMKF FDDQ
|
|---|
| |