| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0162 |
|---|
| Symbol | |
|---|
| ID | 4241755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 244314 |
|---|
| End bp | 244883 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638105510 |
|---|
| Product | redoxin |
|---|
| Protein accession | YP_720129 |
|---|
| Protein GI | 113474068 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0678] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.648171 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTATTG ACAAAGTTCC TGACGTAGTA TTCAAGACCC GTGTCCGTGA TGAGTCAGTT
GATGGGCCAA ATCCTTTCCG GTGGCAAGAC AAAACTACTC AAGAAATTTT TGGTGGCAAG
CGTGTTGTCT TATTTGCATT ACCCGGTGCT TTTACACCAA CCTGCTCATC TACTCACCTA
CCCCGCTATG AAGAACTATA CAATGAATTT AAAGGACAAG GAATAGATGA AATTATCTGT
CTATCAGTAA ATGATGCTTT TGTGATGTTT CAATGGGGTA AACAGCAAGG TTCTAAAAAC
GTATTCCTAC TACCAGATGG TAATGGAGAA TTCTCTCGCA AAATGGGAAT GTTAGTAGAA
AAGTCCAATC TAGGTTTTGG TATGCGTTCT TGGCGCTATG CAATGGTTGT GAATGACTGC
ACAATTGAAA AGATGTTTGT TGAGGAAGGT TTTGCTGACA ACTATGGTGA TGACCCATTT
GAGGTATCTG ATGCAGATAC AGTATTAGCT TTTCTCAAAG GTCAAGAAGC ACCAAAAGAC
AAACCAGCTA GATTAGATTT TGTGGGATAG
|
|---|
| Protein sequence | MVIDKVPDVV FKTRVRDESV DGPNPFRWQD KTTQEIFGGK RVVLFALPGA FTPTCSSTHL
PRYEELYNEF KGQGIDEIIC LSVNDAFVMF QWGKQQGSKN VFLLPDGNGE FSRKMGMLVE
KSNLGFGMRS WRYAMVVNDC TIEKMFVEEG FADNYGDDPF EVSDADTVLA FLKGQEAPKD
KPARLDFVG
|
|---|
| |