Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0161 |
Symbol | |
ID | 4241754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 242603 |
End bp | 243415 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638105509 |
Product | glutamate racemase |
Protein accession | YP_720128 |
Protein GI | 113474067 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0796] Glutamate racemase |
TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0534068 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACTG AAACCAGACA AAAAAGAATA GGAATTTTTG ACAGTGGGAT AGGTGGCTTA ACTGTTTTAA GAGAATTATA TAGACAGTTA CCCAAAGAAT CTATTCTTTA CTTTGCCGAT ACAGCAAGAT TACCTTATGG AACAAGAACT ACCGAAGAGA TTTTACAATT TGTAGATGAA ATTATTACAT GGCTAGTCAA AAGTGGAGTA AAAATGGTGT TGATGGCTTG CAATACCAGT TCAGCTTTGG CTCTAGAAAA AGTTAAATCA AAATTTGATG TTCCTATTCT AGGATTAATT GTACCTGGAG CTAATACTGC AGTGAAACAA GGAAAGAGAA TAGGTGTTAT TGCGACTCCT GCAACTGCTG CTAGTAATGC ATATCGTTAT GCTATTTTAG AAGCAAATGC TTCTGTTCAA GTTTGGCAAG TTGGTTGTCC CTATTTCGTA CCATTAATAG AGCAAAATCA GCTACATGAT CCCTACACAT ATCAGATAGC AGAAGAATAT TTAATGCCTC TAATACAGCA ACAAATTGAT ACATTAGTTT ATGGTTGCAC TCACTATCCT TATTTAGAAC CAATATTGCG TTCATTATTA CCTAAGTCGG TGATTTTTGT AGATCCTGCA GTTTCTCTGG TTAAGGTAGT AGCTAGAGAG TTAAAAATTA TGAATTTGGA AAACGATAAA ACACCAAAAC CAACAAAATT TGTAGTTAGT TCTTCTCCAC AAAAATTTGC TGATTTATCA TTACAATTGC TTGGTTACAA ACCAGATGTA CAAGTAATTT CTTTACCAGC TATGCTAAAG TAA
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Protein sequence | MTTETRQKRI GIFDSGIGGL TVLRELYRQL PKESILYFAD TARLPYGTRT TEEILQFVDE IITWLVKSGV KMVLMACNTS SALALEKVKS KFDVPILGLI VPGANTAVKQ GKRIGVIATP ATAASNAYRY AILEANASVQ VWQVGCPYFV PLIEQNQLHD PYTYQIAEEY LMPLIQQQID TLVYGCTHYP YLEPILRSLL PKSVIFVDPA VSLVKVVARE LKIMNLENDK TPKPTKFVVS SSPQKFADLS LQLLGYKPDV QVISLPAMLK
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