Gene Tery_0161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0161 
Symbol 
ID4241754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp242603 
End bp243415 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content34% 
IMG OID638105509 
Productglutamate racemase 
Protein accessionYP_720128 
Protein GI113474067 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0534068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACTG AAACCAGACA AAAAAGAATA GGAATTTTTG ACAGTGGGAT AGGTGGCTTA 
ACTGTTTTAA GAGAATTATA TAGACAGTTA CCCAAAGAAT CTATTCTTTA CTTTGCCGAT
ACAGCAAGAT TACCTTATGG AACAAGAACT ACCGAAGAGA TTTTACAATT TGTAGATGAA
ATTATTACAT GGCTAGTCAA AAGTGGAGTA AAAATGGTGT TGATGGCTTG CAATACCAGT
TCAGCTTTGG CTCTAGAAAA AGTTAAATCA AAATTTGATG TTCCTATTCT AGGATTAATT
GTACCTGGAG CTAATACTGC AGTGAAACAA GGAAAGAGAA TAGGTGTTAT TGCGACTCCT
GCAACTGCTG CTAGTAATGC ATATCGTTAT GCTATTTTAG AAGCAAATGC TTCTGTTCAA
GTTTGGCAAG TTGGTTGTCC CTATTTCGTA CCATTAATAG AGCAAAATCA GCTACATGAT
CCCTACACAT ATCAGATAGC AGAAGAATAT TTAATGCCTC TAATACAGCA ACAAATTGAT
ACATTAGTTT ATGGTTGCAC TCACTATCCT TATTTAGAAC CAATATTGCG TTCATTATTA
CCTAAGTCGG TGATTTTTGT AGATCCTGCA GTTTCTCTGG TTAAGGTAGT AGCTAGAGAG
TTAAAAATTA TGAATTTGGA AAACGATAAA ACACCAAAAC CAACAAAATT TGTAGTTAGT
TCTTCTCCAC AAAAATTTGC TGATTTATCA TTACAATTGC TTGGTTACAA ACCAGATGTA
CAAGTAATTT CTTTACCAGC TATGCTAAAG TAA
 
Protein sequence
MTTETRQKRI GIFDSGIGGL TVLRELYRQL PKESILYFAD TARLPYGTRT TEEILQFVDE 
IITWLVKSGV KMVLMACNTS SALALEKVKS KFDVPILGLI VPGANTAVKQ GKRIGVIATP
ATAASNAYRY AILEANASVQ VWQVGCPYFV PLIEQNQLHD PYTYQIAEEY LMPLIQQQID
TLVYGCTHYP YLEPILRSLL PKSVIFVDPA VSLVKVVARE LKIMNLENDK TPKPTKFVVS
SSPQKFADLS LQLLGYKPDV QVISLPAMLK