| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0142 |
|---|
| Symbol | |
|---|
| ID | 4242427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 207806 |
|---|
| End bp | 208861 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638105491 |
|---|
| Product | fatty acid desaturase |
|---|
| Protein accession | YP_720110 |
|---|
| Protein GI | 113474049 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3239] Fatty acid desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0617716 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTAT CAATTAAAGA ATCTGCTCAG GTCAATTCTA ATGGTCAAAA GCACCAACTA
CAGCTAAAAG ATATTGTAAA AACTTTGCCG CGAGAAGTTT TCATCAAAGA TCGATGGAAA
ACATGGGCAA TGGTGACAAC CAATATATTC ATGGTAATTT TAGGTTATTG GGGACTAATA
ATTGCACCTT GGTTTTTATT GCCCCTACTC TGGGTTTTCA CTGGCACTGC ATTAACAGGG
TTTTTTGTTA TTGGCCATGA CTGCGGTCAT CGCTCTTTTG CTAACCGTAG GTGGGTAAAT
GATTTAGTTG GTCATTTGGT GTTTTTACCC TTAATTTATC CCTTTCATGG TTGGCGAATA
GGCCATAATC ATCACCACAA ACATACTAAT AAGATGGGTG AGGACAATGC TTGGCAACCT
TGGTATCCAG AAGATTATGA GGTTGCTGGT AGTTCGATGC AGTTAGTGTA TAGGGTTATG
CGTGGTAGAC TCTGGTGGTT AGCTTCTATT GCTCACTGGG CAGTTGTGCA TTTTGATTGG
AGAAAATTTG AGAAAAATAA TAAGGAAGAT GTAAAGTTTT CTGCATTGGT AGTTTTTGGG
TTTAGTGCGA TCGCATTTCC TTTGTTAATA GCTACAGTTG GTATGTGGGG TTTACTCAAG
TTTTGGTTCA TGCCTTGGTT AGTTTACCAT TTCTGGATGA GTACATTTAC TATTGTTCAC
CATACAGTAC CAGAAATTCC CTTTACTCCT GTCCCAGAGT GGAATGAAGC AGAGGCTCAA
TTATTTGGTA CAGTACATTG TGATTATCCC CGTTGGGTAG AATTTCTATG TCATGATATT
AATGTACATA TTCCCCATCA TATCTCAACA GGAATTCCTT CATATAATCT TAGGCAAGCA
CATCAATTTT TGAAGGATAA ATGGGGAGAT AAACTTTATG AAACTCATTT TTCTTGGTCT
TTAATGAAAA AAATAACAGA TCAGTGTCAT TTGTATAATC AGACTAAGTT CTATCTCAGT
TTTAAAGAAT ATGATGCTCA GAAAGTTTCC CAGTAA
|
|---|
| Protein sequence | MTVSIKESAQ VNSNGQKHQL QLKDIVKTLP REVFIKDRWK TWAMVTTNIF MVILGYWGLI
IAPWFLLPLL WVFTGTALTG FFVIGHDCGH RSFANRRWVN DLVGHLVFLP LIYPFHGWRI
GHNHHHKHTN KMGEDNAWQP WYPEDYEVAG SSMQLVYRVM RGRLWWLASI AHWAVVHFDW
RKFEKNNKED VKFSALVVFG FSAIAFPLLI ATVGMWGLLK FWFMPWLVYH FWMSTFTIVH
HTVPEIPFTP VPEWNEAEAQ LFGTVHCDYP RWVEFLCHDI NVHIPHHIST GIPSYNLRQA
HQFLKDKWGD KLYETHFSWS LMKKITDQCH LYNQTKFYLS FKEYDAQKVS Q
|
|---|
| |