Gene Tery_0133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0133 
Symbol 
ID4242418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp194505 
End bp195692 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content32% 
IMG OID638105482 
Producthypothetical protein 
Protein accessionYP_720101 
Protein GI113474040 
COG category[S] Function unknown 
COG ID[COG1649] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.288293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.118371 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAAT CCAAATCAAT TTACCGAATC ATTACCTTAA CACTAATGGC AATTTTCACC 
ACAATCACAT TTGTATTAGC ATCTAATCAA ATTAGTAAAT CTGCACAAAA AACAGAAATT
CGTGGTGTTT GGATAACCAA CATTGACAGC GAGGTTTTAT TTTCTAGTTC AGAGACAAAA
ACAGCAATTA ATCGTTTAGC AAATCTCAAC TTCAACACAC TTTATCCCAC TATTTGGCAA
GGTGGTTATA CTCTCTATCC TAGTCAAGTA GCTCAACAAG TATTTGGCAA ATCATTAGAT
CCTGAAACTG GTTTACAAGG ACGAGATGTT TTACAAGAAA TTATTAGTGA AGGACACGAA
AAAGGTTTAA CAATTATTCC TTGGTTTGAA TTTGGTTTTA TGGCACCTGC AGATTCAGAA
TTAGCAAGAT TACATCCTAA TTGGCTGACT AAACGTAGGG ATGGAACTAC TATAAAAATG
GAAGGAAAAT ATCCTAGAGT TTGGCTTAAT CCTTTTCATC CAGAAGTGCA ACAATTTATT
TTAGATTTAG TCATAGAAAT TGTGACTAAA TATGATATAG ATGGAATACA ATTTGATGAT
CATTTTGGCT TACCTTCTGA ATTTGGTTAT GATGATTTTA CAGTAAAATT ATATGAAAAA
GAATTTCCTG GTTTATTGCC TTCTGATGAT TATAAAGAAA CTTTTTGGGT TCGTTGGAGA
GCAAATAAAA TTAATAATTT TATGGAGCGG GTTTCTAAAG AAATAAAAGC GATAAAACCG
GACTATATTA TTTCTGTATC TCCAAATCCT TTACACTTTG CTTTATCTGC TTATTTGCAA
GATTGGTTTA CTTGGGAAAG GGAAAAATGG ATTGATGAAA TTGTTTTACA GGTTTATCGT
CCAGATATTA AACGTTTTAT GAATGAGTTG GAACAAACAG AGGTAAAATT AGCAAAAAAT
CATATCCCTT TTGCTATTGG AATTTTGACT GGTTTAAAAG ATAATTCTAC TCCGATAAAG
ACAATTGAAG AACAGGTAGA AGTTGTGCGG AAAAGAAATT TTGCGGGAGT ATCATTCTTT
TTCTATGAAA GTTTATGGAA ATGGGGAAAG GAGTCAGAAA ATATCAGAAA TAAAAGTTTT
GAGGAAATGT TTAAACATAA AACTTATAGA CCATATATAT CTGGTTAA
 
Protein sequence
MSKSKSIYRI ITLTLMAIFT TITFVLASNQ ISKSAQKTEI RGVWITNIDS EVLFSSSETK 
TAINRLANLN FNTLYPTIWQ GGYTLYPSQV AQQVFGKSLD PETGLQGRDV LQEIISEGHE
KGLTIIPWFE FGFMAPADSE LARLHPNWLT KRRDGTTIKM EGKYPRVWLN PFHPEVQQFI
LDLVIEIVTK YDIDGIQFDD HFGLPSEFGY DDFTVKLYEK EFPGLLPSDD YKETFWVRWR
ANKINNFMER VSKEIKAIKP DYIISVSPNP LHFALSAYLQ DWFTWEREKW IDEIVLQVYR
PDIKRFMNEL EQTEVKLAKN HIPFAIGILT GLKDNSTPIK TIEEQVEVVR KRNFAGVSFF
FYESLWKWGK ESENIRNKSF EEMFKHKTYR PYISG