Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0109 |
Symbol | |
ID | 4243050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 149231 |
End bp | 150202 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638105462 |
Product | protochlorophyllide oxidoreductase |
Protein accession | YP_720081 |
Protein GI | 113474020 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01289] light-dependent protochlorophyllide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAAA ATCATAAATC AACAGTAGTA ATTACAGGTG CATCCTCAGG GGTAGGTTTA CACGCTGCAA AAGCTCTAGC TAAAACAGGT GAATGGTATG TTGTAATGGC CTGTCGAGAC ATCTCAAAAG CAGAAAAAGT TGCCCAAGAA GTAGGAATGA CACAAGACAG TTACACTGTT ATGCACCTAG ACTTGGCCAG TTTAGAAGTT GTAAAAAGGT TTGTCAAGAC TTTTAGAGAA AGTGGTAGGT CTCTAGAAGC TTTAGTCTGC AATGCTGCAG TATATTTGCC ATTATTAAAA GAACCGATGC GGAGTATAGA TGGATATGAA ATAAGTGTTG CTACAAATCA TCTTGGGCAT TTTCTCCTCT GTAATTTGAT GTTAGAGGAT TTGAAAAAGT CTCCTGCTAA AGATAAAAGA TTAGTAATTT TAGGAACTGT AACAGCTAAC CCGAAAGAGT TAGGAGGAAA AATCCCGATT CCAGCACCTC CAGATTTAGG AAACTTGCAG GGCTTTGAAC AGGGTTTCAA AACTCCTATT TCAATGATTA ACGCTAAGAA ATTTAAGTCT GGCAAAGCTT ACAAAGATAG CAAACTCTGT AATGTGTTGA CAATGCGAGA GTTGCATCGG CGTTATTACA AATCAACGGG AATTGTTTTT AGTTCTCTGT ATCCTGGATG TGTGGCAGAT ACACCTCTAT TTCGAAATCA TTATCCTTTA TTCCAAAAAC TGTTCCCACT GTTTCAAAAG AACATTACTG GAGGATATGT TTCTCAAGAT TTGGCAGGGG AAAGGGTTGC TGCTGTGGTT AAAGATCCTG AGTATAAGGA GTCTGGCATC TATTGGAGCT GGGGAAATCG TCAAAAGAAG GATCGTAAGT CTTTTGTACA AGAGGTTTCT GATGAAGCCA GTGATGATGA TAAGGCAATT AAACTTTGGG AACTAAGTTC TAAGTTGGTA GGACTGAGTT AG
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Protein sequence | MKENHKSTVV ITGASSGVGL HAAKALAKTG EWYVVMACRD ISKAEKVAQE VGMTQDSYTV MHLDLASLEV VKRFVKTFRE SGRSLEALVC NAAVYLPLLK EPMRSIDGYE ISVATNHLGH FLLCNLMLED LKKSPAKDKR LVILGTVTAN PKELGGKIPI PAPPDLGNLQ GFEQGFKTPI SMINAKKFKS GKAYKDSKLC NVLTMRELHR RYYKSTGIVF SSLYPGCVAD TPLFRNHYPL FQKLFPLFQK NITGGYVSQD LAGERVAAVV KDPEYKESGI YWSWGNRQKK DRKSFVQEVS DEASDDDKAI KLWELSSKLV GLS
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