Gene Tery_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0109 
Symbol 
ID4243050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp149231 
End bp150202 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content39% 
IMG OID638105462 
Productprotochlorophyllide oxidoreductase 
Protein accessionYP_720081 
Protein GI113474020 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01289] light-dependent protochlorophyllide reductase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAA ATCATAAATC AACAGTAGTA ATTACAGGTG CATCCTCAGG GGTAGGTTTA 
CACGCTGCAA AAGCTCTAGC TAAAACAGGT GAATGGTATG TTGTAATGGC CTGTCGAGAC
ATCTCAAAAG CAGAAAAAGT TGCCCAAGAA GTAGGAATGA CACAAGACAG TTACACTGTT
ATGCACCTAG ACTTGGCCAG TTTAGAAGTT GTAAAAAGGT TTGTCAAGAC TTTTAGAGAA
AGTGGTAGGT CTCTAGAAGC TTTAGTCTGC AATGCTGCAG TATATTTGCC ATTATTAAAA
GAACCGATGC GGAGTATAGA TGGATATGAA ATAAGTGTTG CTACAAATCA TCTTGGGCAT
TTTCTCCTCT GTAATTTGAT GTTAGAGGAT TTGAAAAAGT CTCCTGCTAA AGATAAAAGA
TTAGTAATTT TAGGAACTGT AACAGCTAAC CCGAAAGAGT TAGGAGGAAA AATCCCGATT
CCAGCACCTC CAGATTTAGG AAACTTGCAG GGCTTTGAAC AGGGTTTCAA AACTCCTATT
TCAATGATTA ACGCTAAGAA ATTTAAGTCT GGCAAAGCTT ACAAAGATAG CAAACTCTGT
AATGTGTTGA CAATGCGAGA GTTGCATCGG CGTTATTACA AATCAACGGG AATTGTTTTT
AGTTCTCTGT ATCCTGGATG TGTGGCAGAT ACACCTCTAT TTCGAAATCA TTATCCTTTA
TTCCAAAAAC TGTTCCCACT GTTTCAAAAG AACATTACTG GAGGATATGT TTCTCAAGAT
TTGGCAGGGG AAAGGGTTGC TGCTGTGGTT AAAGATCCTG AGTATAAGGA GTCTGGCATC
TATTGGAGCT GGGGAAATCG TCAAAAGAAG GATCGTAAGT CTTTTGTACA AGAGGTTTCT
GATGAAGCCA GTGATGATGA TAAGGCAATT AAACTTTGGG AACTAAGTTC TAAGTTGGTA
GGACTGAGTT AG
 
Protein sequence
MKENHKSTVV ITGASSGVGL HAAKALAKTG EWYVVMACRD ISKAEKVAQE VGMTQDSYTV 
MHLDLASLEV VKRFVKTFRE SGRSLEALVC NAAVYLPLLK EPMRSIDGYE ISVATNHLGH
FLLCNLMLED LKKSPAKDKR LVILGTVTAN PKELGGKIPI PAPPDLGNLQ GFEQGFKTPI
SMINAKKFKS GKAYKDSKLC NVLTMRELHR RYYKSTGIVF SSLYPGCVAD TPLFRNHYPL
FQKLFPLFQK NITGGYVSQD LAGERVAAVV KDPEYKESGI YWSWGNRQKK DRKSFVQEVS
DEASDDDKAI KLWELSSKLV GLS