Gene Tery_0103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0103 
Symbol 
ID4243044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp140161 
End bp140898 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content36% 
IMG OID638105458 
ProductPirin-like 
Protein accessionYP_720077 
Protein GI113474016 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCAAC TACAAGAGGT AGAAAAGGTT AAAGTACGAA AAGGTACAGA AAGAGGAGGC 
GCAAATCATG GTTGGCTCAA TACTAAGCAT ACATTTTCTT TTGCAAATTA TTTTGATCCC
AAACACATGG GTTTTCGTTG CCTCAGAGTA ATTAATGAAG ATACGGTTAC TCCTGGTAAT
GGTTTCGGAA CTCATGGACA TCGAGATATG GAAATTATTA CTTATGTCTT AGAAGGATCA
TTAGAACATA AAGATACTAT AGGTCAAGGT GGTGTATTAT CTCCTGGAGA TGTACAACAC
ATGAGTGCAG GTACAGGAAT TATGCACAGT GAATATAACC GCTCAACATC AGAAAATGTT
CATTTTTTAC AAATATGGCT ACTGCCAAAG GCTAATGCTG TAAAACCAGT ATATCATCAA
AGCTCTTTTA ATATAGAAAA AAACTCTGGT AAGTTAAACT TAGTAGTTGC TGTAGATGGT
AGGGATGGCG CACTAAAAGT TAATCAAGAT GTGGATTTAT TTGCAAGTGT TTTGAGAGAG
GGCGATCGCA TTTCTTATTC TTTTAAAGAT AACCGTTATG GATGGGTGCA AGTGGCTCGT
GGGGAAGTAG ATATTGAAGT AGATACTAAT AACAAATTAT CTCTCAACGC TGGAGATGGT
GTTGCTTTAA GTGAAATCCA AAATATTTCT ATTTCAACTA AGTCCAATGG AGAAATTCTT
TTATTTGATT TGCCATAA
 
Protein sequence
MVQLQEVEKV KVRKGTERGG ANHGWLNTKH TFSFANYFDP KHMGFRCLRV INEDTVTPGN 
GFGTHGHRDM EIITYVLEGS LEHKDTIGQG GVLSPGDVQH MSAGTGIMHS EYNRSTSENV
HFLQIWLLPK ANAVKPVYHQ SSFNIEKNSG KLNLVVAVDG RDGALKVNQD VDLFASVLRE
GDRISYSFKD NRYGWVQVAR GEVDIEVDTN NKLSLNAGDG VALSEIQNIS ISTKSNGEIL
LFDLP