Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0058 |
Symbol | |
ID | 4242441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 81365 |
End bp | 81982 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638105425 |
Product | pentapeptide repeat-containing protein |
Protein accession | YP_720044 |
Protein GI | 113473983 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.108417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.321284 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACAGAC GTTGCATACA ACTTACCTCT CTATTCCTAA TTCCTAACCT CAGCCATAAT ACTTCTCTAT TGATCTCATT TTTTTCTATT AACTCAAAAA ATGCTGTCAT GGCTAAAATC AAACTCAAAA TATTAATAAT AAATCTATTA GTTTCACTAG CTTTTGCCAA ACCTGTAGTT GCATACATAA AGTGGCAAGC ACAAACTTTA AAACGCTCAA GAGAATGTTT TTATTGTGAT CTTTCCAAGA TTAACCTCAG TAATTCTAAT TATAAAAAAA TGAATGTAAC TGGTTCAGTA TTACAGAATG CTGACTTCTC TAATACAAAT CTTGAAAAAG CCAATTTTAC CAATACAGAT TTAACAGAAG CAGAATTCGA CAGTGCCAAC TTACAAGAAG CTAACTTACA GAGATCTATC CTCAAGAGAA CAAACTTTTG GGGAGCAAAT CTCCAGAAGG CAAATTTACG CGGAGCTGAT TTAACAGAAA CTATTTTTTG GAATGCTGAT TTAAGAGACG CAGATTTGCG GGATACTAAT ATAAATAATG CCAGCTTTAT TGATGCTCAA CTAAAAGGTG CAATTTTACC CGATGGTACT GTATATCCTT ACAAATAA
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Protein sequence | MYRRCIQLTS LFLIPNLSHN TSLLISFFSI NSKNAVMAKI KLKILIINLL VSLAFAKPVV AYIKWQAQTL KRSRECFYCD LSKINLSNSN YKKMNVTGSV LQNADFSNTN LEKANFTNTD LTEAEFDSAN LQEANLQRSI LKRTNFWGAN LQKANLRGAD LTETIFWNAD LRDADLRDTN INNASFIDAQ LKGAILPDGT VYPYK
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