Gene Tery_0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0058 
Symbol 
ID4242441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp81365 
End bp81982 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content33% 
IMG OID638105425 
Productpentapeptide repeat-containing protein 
Protein accessionYP_720044 
Protein GI113473983 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.108417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.321284 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAGAC GTTGCATACA ACTTACCTCT CTATTCCTAA TTCCTAACCT CAGCCATAAT 
ACTTCTCTAT TGATCTCATT TTTTTCTATT AACTCAAAAA ATGCTGTCAT GGCTAAAATC
AAACTCAAAA TATTAATAAT AAATCTATTA GTTTCACTAG CTTTTGCCAA ACCTGTAGTT
GCATACATAA AGTGGCAAGC ACAAACTTTA AAACGCTCAA GAGAATGTTT TTATTGTGAT
CTTTCCAAGA TTAACCTCAG TAATTCTAAT TATAAAAAAA TGAATGTAAC TGGTTCAGTA
TTACAGAATG CTGACTTCTC TAATACAAAT CTTGAAAAAG CCAATTTTAC CAATACAGAT
TTAACAGAAG CAGAATTCGA CAGTGCCAAC TTACAAGAAG CTAACTTACA GAGATCTATC
CTCAAGAGAA CAAACTTTTG GGGAGCAAAT CTCCAGAAGG CAAATTTACG CGGAGCTGAT
TTAACAGAAA CTATTTTTTG GAATGCTGAT TTAAGAGACG CAGATTTGCG GGATACTAAT
ATAAATAATG CCAGCTTTAT TGATGCTCAA CTAAAAGGTG CAATTTTACC CGATGGTACT
GTATATCCTT ACAAATAA
 
Protein sequence
MYRRCIQLTS LFLIPNLSHN TSLLISFFSI NSKNAVMAKI KLKILIINLL VSLAFAKPVV 
AYIKWQAQTL KRSRECFYCD LSKINLSNSN YKKMNVTGSV LQNADFSNTN LEKANFTNTD
LTEAEFDSAN LQEANLQRSI LKRTNFWGAN LQKANLRGAD LTETIFWNAD LRDADLRDTN
INNASFIDAQ LKGAILPDGT VYPYK