| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0027 |
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| Symbol | |
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| ID | 4241834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 45501 |
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| End bp | 48125 |
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| Gene Length | 2625 bp |
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| Protein Length | 874 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638105404 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_720023 |
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| Protein GI | 113473962 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACCC TTGTTATTGT AGAATCTCCG ACTAAAGCCC GCACCATTCG CAACTATCTA
CCCTCCGACT ACCGCGTGGA AGCATCTATG GGTCATGTGC GTGACCTACC ACCTTCTGCC
GAGGAAATAC CAGAAAAATT CAAAGGAGAA AAGTGGGCAC AGTTAGGGGT AAATGTAGAG
TCAGATTTTG AACCAATCTA CGTTGTCCCC AAAGACAAAA AGAAAACTGT CAAAGAACTC
AAAGATGCTC TGAAAGAAGT TGATGAATTA CTTCTAGCCA CAGATGAAGA CCGTGAAGGA
GAAAGTATAA GTTGGCATTT ATTGCAACTA CTAAAACCAA AAGTTCCTAC TAAACGGATG
GTCTTCCATG AAATTACTCC AGAAGCTATC CGTAGAGCAA TTGATAATTG TCGTAACATA
GATGAGCAGT TAGTCAGGGC ACAAGAAACT CGTCGTATTC TAGACCGCCT CTACGGTTAT
ACTCTCTCAC CTGTACTTTG GAAAAAAATT GCCAGAGGTC TTTCTGCAGG TAGAGTACAG
TCAGTAGCAG TCCGACTCTT GGTTAACCGA GAACGCCAAC GTCAGGCTTT TAAGCGAGGA
GGTTATTGGG ATTTAAAGGC TAGTTTAGAA CAAGAAAAAA CTCCATTTGA GTCTAAACTT
GTGACCCTTG GGGGGACAAA AATAGCTACT GGTAATGACT TTGATGAAAA TACAGGCAAA
ATAGTTGAAG GTCGTAATGT TATTTTATTG GACGAAGCTC ATGCAGAAGC TCTCAAAGAA
CAACTGCAAC ATAAGCCTTG GACTGTTAAT AGTTTTGATG AACGAGCTGT TAGACGTAAA
CCATCTCCAC CATTTACTAC TTCTACTTTA CAACAGGAAG CTAACCGCAA ACTACGAATG
GGTGCTAGGC AAACAATGCG GACAGCCCAA AATTTATATG AACAGGGCTT TATCACTTAT
ATGCGGACAG ACTCAGTACA TTTGTCTGAT GAGGCGATCG CTGCTGCCCG AAGTTGTGTT
GAGAAAATGT ATGGCCCGGA ATATCTAAGT TCTGAACCTA GGCAATACAC TACTAAAAGT
AAGGGGGCTC AGGAAGCTCA CGAAGCTATT CGCCCTGCAG GTAAAACTTT TCGCACTCCC
CAGGAAACAG GATTGAAAAA TCAAGAATTT GCTCTCTATG ACTTAATTTG GAAAAGAACA
GTAGCTTGTC AAATGGCTGA TTCTCGTCAA ACCCATATTA CAGTTAATTT ACAAGTAGAA
GATGCTGGTT TTCGTTCTAA TGGAAAACGG ATAGACTTTC CTGGGTTCCT CCGGGCTTAT
GTTGAAGGGT CTGATGACCC CGAAGTATCT TTGGAAAACC AAGAAGTACC ATTGCCTGCT
ATAAAACAGG GAGACCATCC TGCTTGCACA GAAATAGAAG TAGTGGGTCA TGAAACTCAG
CCACCTGCCA GGTTTACCGA AGCGTCTTTG GTAAAAACTT TGGAAAGTGA AGGTATCGGC
CGTCCGAGTA CCTACGCTAC TGTTATTGGT ACTATTGTTG ATCGTGGTTA TGCCAAACTC
CAGAGTAATG CTTTAGTTCC AACATTTACT GCTTTTGCTG TTACAACTTT ACTGGAAAAA
CATTTTCCTG AGTTTGTAGA TGTCAAGTTT ACTGCCCGTA TGGAACAAAC CCTCGATGAC
ATTTCTATGG GTGAAGCTCA GTGGGTACCT TACCTTAAAA AATTTTATTT TGGGGAAAGT
GGACTTGATA CTCAAATCAA GGAACAGGAA AATCAAATTG ACCCTAAGTT GGCCCGAACT
ATTGAGTTAG ATAATTTGGA TGCTAATTCA GAGATGACTT ATCGTATATG TATTGGTAAG
TTTGGTGCTT ATATTGAGGC AGAAAATGGT GAGAATATAG TCAAAGCTTC TATTCCTGAA
GATTTAACTC CATCAGACCT AGACCCAGAA CAAATAGAGA AACTGTTGAA GCAAAAAACA
GAGGGTCCGC AGGAGTTGGG AATTCATCCA GAAGAAGATA AGTCTATCTA TATAATGACT
GGTCGTTACG GTCCTTATGT GCAGTTGGGT GATGATTCTG AGGGTAGTAA GAGGAAACCA
AAGCGAGCTT CTTTGCCAAA GGGTGTCAAT ATGGAGGATG TAACTTTGGA TCTAGCGGTA
GGGTTATTAT CTTTACCTCG TACTTTGGGA ACTCATCCAG AAACTGGTTG CAAAATTCAA
GCTAATTTAG GACGTTTTGG CCCATATATC GTTCACGACC AGGGAAAGGA GGATGGTAAA
GACTATCGTT CTTTAAAGGT TAAGGATGAT GTTTTGACTA TTACTTTGGA ACGTGCTTTG
GAGTTATTAG CTCAACCGAA AAGATCGAGG AGAGGTAGTG CTAAAGCTGT ACTTCCCCTC
AAAGATTTGG GTAAACATCC TGAAGATGGA GAAACAGTAG GTGTTTATGA TGGTCGATAT
GGACTTTATG TGAAGCATGG TAAGGTTAAT GCTTCTTTGC CTAAGGATAT GTCTGTTGAG
GATGTAACTT GGGAAAAGGC TCTAGAGCTT TTGCATGCTA AGGCTAGTAG TAAAAAATCT
GCTCGTGGTA GGAAATCCAC AAAGTCAAAA GCCGAAAATA ACTAG
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| Protein sequence | MSTLVIVESP TKARTIRNYL PSDYRVEASM GHVRDLPPSA EEIPEKFKGE KWAQLGVNVE
SDFEPIYVVP KDKKKTVKEL KDALKEVDEL LLATDEDREG ESISWHLLQL LKPKVPTKRM
VFHEITPEAI RRAIDNCRNI DEQLVRAQET RRILDRLYGY TLSPVLWKKI ARGLSAGRVQ
SVAVRLLVNR ERQRQAFKRG GYWDLKASLE QEKTPFESKL VTLGGTKIAT GNDFDENTGK
IVEGRNVILL DEAHAEALKE QLQHKPWTVN SFDERAVRRK PSPPFTTSTL QQEANRKLRM
GARQTMRTAQ NLYEQGFITY MRTDSVHLSD EAIAAARSCV EKMYGPEYLS SEPRQYTTKS
KGAQEAHEAI RPAGKTFRTP QETGLKNQEF ALYDLIWKRT VACQMADSRQ THITVNLQVE
DAGFRSNGKR IDFPGFLRAY VEGSDDPEVS LENQEVPLPA IKQGDHPACT EIEVVGHETQ
PPARFTEASL VKTLESEGIG RPSTYATVIG TIVDRGYAKL QSNALVPTFT AFAVTTLLEK
HFPEFVDVKF TARMEQTLDD ISMGEAQWVP YLKKFYFGES GLDTQIKEQE NQIDPKLART
IELDNLDANS EMTYRICIGK FGAYIEAENG ENIVKASIPE DLTPSDLDPE QIEKLLKQKT
EGPQELGIHP EEDKSIYIMT GRYGPYVQLG DDSEGSKRKP KRASLPKGVN MEDVTLDLAV
GLLSLPRTLG THPETGCKIQ ANLGRFGPYI VHDQGKEDGK DYRSLKVKDD VLTITLERAL
ELLAQPKRSR RGSAKAVLPL KDLGKHPEDG ETVGVYDGRY GLYVKHGKVN ASLPKDMSVE
DVTWEKALEL LHAKASSKKS ARGRKSTKSK AENN
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