Gene Tery_0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0021 
Symbol 
ID4241828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp33065 
End bp35353 
Gene Length2289 bp 
Protein Length762 aa 
Translation table11 
GC content36% 
IMG OID638105399 
ProductFHA modulated glycosyl transferase/transpeptidase 
Protein accessionYP_720018 
Protein GI113473957 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.61335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTATT CTCAGCCTCT TCGTAATTCT CAAACTATTT TGGGTAATAT TACCCAGATG 
ATAAAAACTA TTCATGCTAG TGTCAACTTT TCTAGACTAG CAATTAGACC TAATGCTAGA
GTACCTGAAC TATGGATAGA GGAAGGAAAA GCTACTCCAA CTAAAAAATA TCCTCTTTTG
GGTGATCGTT ATTTGCTCGG ACGCTCCTCC CAAGCTTGTG ACATTGTTAT TCGTAATCAC
CTAATTAGTA AGATTCATTT ATCTATCTCA CGAAACTCAA ATAAGGCTGA CGCCCCTTAT
ATAATAAAAG ATGAAAACTC TCGTAATGGT CTCTACAATG GCAAAAAAAA GATTTATAGT
CTGATTTTAC GTCATGGTGA TATATTAACT CTAGGACCAC CTGCATTAGC TGATACTGTT
AAAGTTCGGT ATATTTATCC TCCTGCGTGG TATACTCAAG CCTTTCGTTA TAGTTTACTT
GGTATTTCTG GATTCACTGC TTTAGTGAGT TTAATTATTC TACTTGAATG GACAAAATTT
CAGGTATACC CTCTACCTAA TCCAATTACA GGCCCAGTAG TTATCTATGC TCGTGATGGA
CAAACACCTC TACGTCCAGT TTATACAAAC TCCCATTATG AATTGGGGCG GATATCTAAA
TTTTCTAAAT ATTTACCAGA CGCAGTCATT GCTTCTGAGG ATAGTCGCTT TTATTGGCAT
ATCGGTATAG ACCCTATTGG AGTTGTCAGG GCAATATTGA CAAATTTACG TTCAGATGGT
AGACGCGAAG GAGGTAGTAC AGTTACTCAG CAGCTAGCAA GAAGTATATT TCGAGATTAT
GTAGGCACCG AAGACTCTGC CAGCAGGAAA ATACGAGAAG CGATAGCGGC ATTAAAATTA
GAAACTTTTT ATAGTAAAGA TGATTTATTA TTAGCTTATC TAAATAAAGT CTATTTAGGA
TTAGATTTAT ACGGATTTGA AGATGCTGCA AGATTTTATT TTGGTAAAAG CGCTCAAAAC
CTAACTTTAT CAGAAGCAGC AACATTAGTA GGAATATTAC CAGCACCTAA TATTTTTAAT
CCAGTACAAA ATTATCAAAT AGCTATAGAA AAAAGAGATG GGGTTCTTTA TCGAATGCTT
AGTTTAGGTA TGATAGACCA ACAGGAAGCA GATAGAGCTA GGCGATCACT CATAGAAATT
AATCCGAAAG CTATAGAAAT TATCCAAAGT ACAATAGCAC CTTATTATTA TAGTCATGTC
TTTAGTGAAC TAGAAAATTT ACTAGGAGAA GACCTAGCTA AAGAAGGAAA TTTTATTGTT
CAAACGGCTT TAAACCCTGA AATTCAAAGC TATGCAGAAA GAACTTTGCA AGATACAATT
AATCAAGTTG GTTCTTATGC TAGCTTTTCT CAAGGAGCTA TAGTTACAAT AGATTCAAGA
AATGGAGAAG TCATAACTCT GATTGGAGGT GTAGACTACA AAAAAAGTCA GTTTAATCGA
GCTACTCAAG CACAACGTCA ACCAGGTTCT ACTTTTAAAG TCTTTGCTTA TGCCGCTGCT
ATAGAAAAGG GTATACCACC AAAAAAATTA TATTCTTGTA GTTCCTTTGG GTGGATGGGT
CAAACTTATG AAGGTTGTCA ACGGAGTAGT GGTAATAGAA ATATGTATGA TGGCTTGGCA
CTTTCTGAGA ATGTGGTAGC TTTGCGGGTC GCTCAACAGG TAGGTTTGGA TAGAGTGGTA
AAAATGGCAA AGGGTTTAGG AATTAAGTCT CAGTTAAGTG CTGTACCTGG ATTGATTTTG
GGTCAAAGTG AAGTTAATGT TTTGGAAATG ACTGGTGCTT ATGGGGTATT TGCTAATGGT
GGAGTGGCCA ATAAACCCCA TACTATTAGA AAGATTATAG ATAGTAGTGA TTGTCGCGAT
CGCAATAATA TTTACACTTG TCGCTGTATT TATTCATACA TACCAGACAC AAATTGTGAA
AACCCCAAAG GAGATATTCA AGCAAACCAA TCTATTATAC AACCATATAT AGCAAGTATT
ATGACTCAAA TGCTCCAAGA TGTTATAAGG CATGGTACAG GTCGTAGTGC TAATTTGGGA
TGGGGAGAAG CAGGTAAAAC TGGTACAACT AACCAAGGAA TAGATATATG GTTTATTGGA
TATATTCCTA ACGAAAGTAT GGTTACAGGG ATTTGGCTAG GAAATGATGA TAACTCTCCT
ACTTATGGTA GTAGTGAACA AGCCGCACAG TTATGGGGAA ATTATATGAA AAAGGTTGTG
AATAAGTAA
 
Protein sequence
MNYSQPLRNS QTILGNITQM IKTIHASVNF SRLAIRPNAR VPELWIEEGK ATPTKKYPLL 
GDRYLLGRSS QACDIVIRNH LISKIHLSIS RNSNKADAPY IIKDENSRNG LYNGKKKIYS
LILRHGDILT LGPPALADTV KVRYIYPPAW YTQAFRYSLL GISGFTALVS LIILLEWTKF
QVYPLPNPIT GPVVIYARDG QTPLRPVYTN SHYELGRISK FSKYLPDAVI ASEDSRFYWH
IGIDPIGVVR AILTNLRSDG RREGGSTVTQ QLARSIFRDY VGTEDSASRK IREAIAALKL
ETFYSKDDLL LAYLNKVYLG LDLYGFEDAA RFYFGKSAQN LTLSEAATLV GILPAPNIFN
PVQNYQIAIE KRDGVLYRML SLGMIDQQEA DRARRSLIEI NPKAIEIIQS TIAPYYYSHV
FSELENLLGE DLAKEGNFIV QTALNPEIQS YAERTLQDTI NQVGSYASFS QGAIVTIDSR
NGEVITLIGG VDYKKSQFNR ATQAQRQPGS TFKVFAYAAA IEKGIPPKKL YSCSSFGWMG
QTYEGCQRSS GNRNMYDGLA LSENVVALRV AQQVGLDRVV KMAKGLGIKS QLSAVPGLIL
GQSEVNVLEM TGAYGVFANG GVANKPHTIR KIIDSSDCRD RNNIYTCRCI YSYIPDTNCE
NPKGDIQANQ SIIQPYIASI MTQMLQDVIR HGTGRSANLG WGEAGKTGTT NQGIDIWFIG
YIPNESMVTG IWLGNDDNSP TYGSSEQAAQ LWGNYMKKVV NK