Gene HS_1774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1774 
Symbol 
ID4241308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1993321 
End bp1995321 
Gene Length2001 bp 
Protein Length666 aa 
Translation table11 
GC content43% 
IMG OID638105367 
Producthypothetical protein 
Protein accessionYP_719979 
Protein GI113461910 
COG category[R] General function prediction only 
COG ID[COG3772] Phage-related lysozyme (muraminidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0983055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAC TCAATAAAGT GAGTATTGCT ATACTTTTCG CACTCACTAC TTCCCCCATT 
TATGCAGAGA CTTCTCTGTT AGATAACCTT CAATTCAACA AATCAGACTC TGTGTTATCC
GATCAAATTT ACTATCAAAT CGGTGGGGGC TCAGGCTATA TGACACCACC GACACGGGCA
AAATCCCTCA AAGCCATTGA ATTTGGGATT GGTTGGAAAG CCAATTTAAT GTGCGGTAAT
TTTGACATTA AAACCACCGT AAAAAATCAA TTAAATGGTA TCACGGAGGG ATTTAAAGAT
TTAATGAGCA ATGTGATAGA ATCGGCAAAA GGTGCGGTAG CCAGTCTTCC TGCTATGGTT
ATTCAACGTG CTAACCCGCA ACTTTATGAC ATTTTGACTA ATGGAGTGTA TCAGGGGCGG
CTTGATTTTA ATCGTCTAAA AACCAGTTGT GAGGCTATGT CGAAACAACT CGCTGACTAT
ACGCTAAATG GGCGTTGGGC AAAATCGGCG GATTTGGAAA ACTATAAAGA CATTGTGGCC
ACTGAACCCG ATGCACAAAA AGCACAGAAA AAATCGGAAG ATAACAAAGG AAAAAATGGT
AAGGAATGGA TTGGCGGTCA AAAACGTGGC GGTGAAAAGC AAGAACAAAT CAAACTGATT
AAAGATGTTT CAGAAGCAGG TTACAACCTC TTACATAACC GCAACGCCTT GGACAAAAAA
CCACTTCTAG GGCCATCTTG TACCGGGGCA ACCTGCCAAA TATTCGATTC GCCACAAAAA
CTCTCCGACT TTTTAACCCG AACTATTGGA GAACAATCTA TTTCTACCTG TATTGAAGAC
TGTGGTCCGA AAACCAGCTC AAAAGCGGGG GTCGGACTCG CTCCTGCGAT TGAAGAAGAA
AATCTGCGAA CCGTAGAGAA ACTTGAACAA GTGCTGAATA TGGACACGCC AAGTAAAGAA
ATACTGGCTG AACTGAGTTC GAATACCATT CCTGTTACAC GGGGACTGAT TGAAGCTTTA
CGTGAAGATC CTGACGTGGA ACTGCTTAGC CAACGTTTGG GTGCCGAAAT CGCTACAGCT
AAAGTCATGG AAAAAATGCT ATTGGCTCGC CGAGCAATAC TTGCCGGAAT GCGAGAACCC
TATGTGGCTG CCGATAAAAA TGCACAGGAG GAGCTGGAAA AAGCTTTAAA TAAAATTGAC
TTGGAAATCT CTCAAGTCAA ACTTGAAATG GATATGCAAA AAATGCTCAC CAGTAATACA
GCATCTGTCG TGATTCAAAA TAAACTCAAC CGTGAAGCCA ATGTGGGGAA CCATGGAGAA
AGCTATGACA ACGTGGATAA ACGAGTCAAT GACTTAGCTT ACGGCTCACC AAATGCAGAA
GAGCATATGG AAGCGAGCGA TATTTCCTTA CCTAGCCGAA ACATCGCCCT AGATATTCCA
ACAGTGAGTA ATACTGCTCC TTATAGACCG TCTTATAATA CAGGCACTCA AGTGGGAAGG
TATTCGGGCA GCTATAATCC CATTGCACCA ATTAATGGTT CTTCACTCGA CCAAGCTACG
GGATTATTAA GAAAATTTGA AGGATTTATT AGCAAAGCGG ATTGGGATGT AAACGCCCAT
CGTGTAGGCT ACGGTTCAGA TACCATTACT AAAGCTGACG GCACGGTGAT CAAAGTACAA
CCCGGAATGA CCGTAACCAG AGAAGATGCT GAGCGTGATT TAGCTCGAAG AACCCAACTC
TACACGAACC AAATCAAACG AGAGATTTCA GAACAAACGT GGAATGGTTT ATCTGATCGT
GCTCAAGCTG TATTAACCTC TTATATTTAT AACTACGGCA CGTTAAATAA GACCAAAAGT
GTCATTAGTG CTGCACAAGC CTCAGCACAA TCAGGAGATA TGACCGCATT GGCCAATGCA
ATTAGAAGAC GTCAAGTGGA CAATAAAGGC GTCAATGCAA GACGCCGAAA TCAAGAAGCC
GATTACATTC TAGGCAAATA G
 
Protein sequence
MKRLNKVSIA ILFALTTSPI YAETSLLDNL QFNKSDSVLS DQIYYQIGGG SGYMTPPTRA 
KSLKAIEFGI GWKANLMCGN FDIKTTVKNQ LNGITEGFKD LMSNVIESAK GAVASLPAMV
IQRANPQLYD ILTNGVYQGR LDFNRLKTSC EAMSKQLADY TLNGRWAKSA DLENYKDIVA
TEPDAQKAQK KSEDNKGKNG KEWIGGQKRG GEKQEQIKLI KDVSEAGYNL LHNRNALDKK
PLLGPSCTGA TCQIFDSPQK LSDFLTRTIG EQSISTCIED CGPKTSSKAG VGLAPAIEEE
NLRTVEKLEQ VLNMDTPSKE ILAELSSNTI PVTRGLIEAL REDPDVELLS QRLGAEIATA
KVMEKMLLAR RAILAGMREP YVAADKNAQE ELEKALNKID LEISQVKLEM DMQKMLTSNT
ASVVIQNKLN REANVGNHGE SYDNVDKRVN DLAYGSPNAE EHMEASDISL PSRNIALDIP
TVSNTAPYRP SYNTGTQVGR YSGSYNPIAP INGSSLDQAT GLLRKFEGFI SKADWDVNAH
RVGYGSDTIT KADGTVIKVQ PGMTVTREDA ERDLARRTQL YTNQIKREIS EQTWNGLSDR
AQAVLTSYIY NYGTLNKTKS VISAAQASAQ SGDMTALANA IRRRQVDNKG VNARRRNQEA
DYILGK