Gene HS_1711 details

Gene Information

• Locus tag: HS_1711
• Symbol: recQ
• ID: 4241238
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: -
• Start bp: 1935345
• End bp: 1937219
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 638105297
• Product: ATP-dependent DNA helicase RecQ
• Protein accession: YP_719916
• Protein GI: 113461847
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0514] Superfamily II DNA helicase
• TIGRFAM ID: [TIGR00614] ATP-dependent DNA helicase, RecQ family; [TIGR01389] ATP-dependent DNA helicase RecQ

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGTTG AAGAATGGAA GCAACAAAAA AGTGCGGTAG ATTTTAGCCA AGATTCTGTG 
GAAAAATCTA CCGCACTTGA TATTTTACAT TCTGTTTTTG GGTATCAGTC CTTCCGTAAA 
GGACAACTGG AAGTTATCGA AGCAACTTTA GCTAAAAAGG ACAGTTTAGT TATTATGGCA 
ACAGGTGGCG GAAAGTCCTT ATGCTATCAA ATTCCCGCTC TTTGTTTCTC CGGTTTAACT 
TTAGTGATTT CTCCTCTAAT TTCATTAATG AAAGACCAAG TAGATCAGTT ATTAGCAAAT 
GGTATAAATG CTGATTATTT AAATTCTAGT CAAACATTTG AACAACAACA GTTGGTTCAA 
AATAAAGCAA TGTCAGGAAA ATTAAAGTTG CTTTATATAT CTCCAGAAAA AGCCTTAACA 
ACCAGCTTTT TTCATTTTAT TTCTCATTGC AAAGTCAGTT TTATTGCCGT TGATGAAACC 
CATTGTATTT CACAGTGGGG ACATGATTTT CGCCCAGAAT ATACTCAATT GGGAGGATTA 
AAAGCAAGTT TTCCTGATGC TCCAATAATG GCACTAACTG CAACAGCAGA TCAGGCAACC 
CGACAAGATA TCCTTATTCA TCTTAAATTA TCTAATCCCC ATATTTATAT CGGTAGTTTT 
GATCGTCCAA ATATTCGTTA CTCCTTAGTT GAAAAATTTA AACCTATGGA GCAACTTTCT 
CAATTTATCG CAAAACAAAA AGGGAAAAGT GGAATTATTT ATTGTAACAG TCGTAATAAG 
GTTGAACGAA TTGCAGAAAG TCTACGCCAA AAAGGAATAT CAGCTGAAGC TTATCATGCT 
GGTATGAGTA ATGAGCAACG AGAATTTGTT CAACGTGCTT TTCAACATGA TAATGTACAA 
ATTGTTGTTG CAACAATTGC TTTTGGAATG GGAATTAATA AATCTAACGT GCGTTTCGTC 
GCTCATTTTG ATCTACCTCG AAGTATCGAG GCATACTATC AGGAAACAGG ACGAGCGGGG 
CGAGATGATT TACCAGCTGA AGCTGTCTTA TTTTACGAAC CTGCAGATTA CGCTTGGTTA 
CAAAAAGTAC TTTTAGAAAA ACCAGATATA CCGCAACGTC AAATAGAACT ACATAAATTA 
CAATCCATAG GGGAATTTGC TGAAAGCCAA ATTTGTCGTC GTTTAGTTCT ATTAAATTAC 
TTTGGTGAAT ATCAACAAAA ACCTTGTAAT AACTGTGATA TTTGTTTAGA TCCTCCGAAA 
AAATATGATG GATTGGTTGA TGCACAAAAA GTAATGTCAG CAATCTATCG AGTGGGGCAA 
CGTTTCGGGG CAATGTATAT TATTGCTGTA CTGCGTGGTT CCCAAAATCA AAAAATTAAA 
GAATATCAAC ATGATAAACT AAGCGTTTTC GGCATTGGTA AAGATCGTAG TAGAGAATAT 
TGGCAATCAG TTATTCGACA ATTAATCCAT TTAGGTCTGA TAAAACAAGT AATTGACCAT 
TTTAATATAA CATTACAACT CACATTAGAT TCATTGCCTA TTTTACGAGG TGAACAACCA 
TTGCAATTAG CAACACCAAG GATATCTTCT ATTACTAATG CCATTACTAT ACCAAAAAGA 
GCGGTCACAA ATTACGATAA AGATCTCTTT GCTCGATTAC GTTTTTTGCG TAAAAAAATA 
GCAGACAAAG AAAATATTCC TCCTTATATA ATATTTAACG ATGCAACATT ACAAGAAATG 
GCACAATACC AACCAACAAC AGAACAAGAA ATGATACAAA TTAATGGTGT CGGCGATATT 
AAATTAAAAC GTTTTGCTCA ACCCTTTCTT GCGTTAATTA AAGAACATCA ATTTTTTAGA 
ACAACAAAAA AATAA 

 

Protein sequence

MSVEEWKQQK SAVDFSQDSV EKSTALDILH SVFGYQSFRK GQLEVIEATL AKKDSLVIMA 
TGGGKSLCYQ IPALCFSGLT LVISPLISLM KDQVDQLLAN GINADYLNSS QTFEQQQLVQ 
NKAMSGKLKL LYISPEKALT TSFFHFISHC KVSFIAVDET HCISQWGHDF RPEYTQLGGL 
KASFPDAPIM ALTATADQAT RQDILIHLKL SNPHIYIGSF DRPNIRYSLV EKFKPMEQLS 
QFIAKQKGKS GIIYCNSRNK VERIAESLRQ KGISAEAYHA GMSNEQREFV QRAFQHDNVQ 
IVVATIAFGM GINKSNVRFV AHFDLPRSIE AYYQETGRAG RDDLPAEAVL FYEPADYAWL 
QKVLLEKPDI PQRQIELHKL QSIGEFAESQ ICRRLVLLNY FGEYQQKPCN NCDICLDPPK 
KYDGLVDAQK VMSAIYRVGQ RFGAMYIIAV LRGSQNQKIK EYQHDKLSVF GIGKDRSREY 
WQSVIRQLIH LGLIKQVIDH FNITLQLTLD SLPILRGEQP LQLATPRISS ITNAITIPKR 
AVTNYDKDLF ARLRFLRKKI ADKENIPPYI IFNDATLQEM AQYQPTTEQE MIQINGVGDI 
KLKRFAQPFL ALIKEHQFFR TTKK