Gene HS_1700 details

Gene Information

• Locus tag: HS_1700
• Symbol: atpF
• ID: 4241227
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: -
• Start bp: 1925713
• End bp: 1926183
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 638105286
• Product: F0F1 ATP synthase subunit B
• Protein accession: YP_719905
• Protein GI: 113461836
• COG category: [C] Energy production and conversion
• COG ID: [COG0711] F0F1-type ATP synthase, subunit b
• TIGRFAM ID: [TIGR01144] ATP synthase, F0 subunit b

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.169268
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACTTAA ATGCAACATT AATAGGTCAG CTGATTGCTT TTGCTATTTT TGTGTGGTTC 
TGTATGAAAT ATGTATGGCC ACCGATTATT AAAGCTATAG AAGAACGTCA AAGATCTATT 
GCAAATGCAC TAGCTTCGGC TGAAGCTGCT AAAAAAGAGC AATCCGATAC AAAGGTTTTA 
GTTGAGCAAG AAATTAATCA AGCTAGAATT AAAGCTCAGG AAATAGTGGA TCTAGCGAAT 
AAACGTCGCA ATGAAATTTT GGAAGAAGTC AAAATTGAAG CTGAGGCATT AAGAGAGAAA 
ATTATTGAAC AGGGACATGC AGAAATAGAA TCTGAACGTA AACGTGTTCA AGAAGAGTTG 
CGTATTAAAG TCGCATCTCT CGCTATTGCC GGTGCTGAGA AAATTGTGGG TCGCAATATT 
GATGAAGCGG CGAACAATGA CATTATTGAT AAATTAGTTG CAGATTTATA G 

 

Protein sequence

MNLNATLIGQ LIAFAIFVWF CMKYVWPPII KAIEERQRSI ANALASAEAA KKEQSDTKVL 
VEQEINQARI KAQEIVDLAN KRRNEILEEV KIEAEALREK IIEQGHAEIE SERKRVQEEL 
RIKVASLAIA GAEKIVGRNI DEAANNDIID KLVADL