| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1690 |
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| Symbol | nqrD |
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| ID | 4241217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 1916044 |
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| End bp | 1916667 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 638105276 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit D |
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| Protein accession | YP_719895 |
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| Protein GI | 113461826 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD |
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| TIGRFAM ID | [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.435559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAATG CAAATATTAA AAAGTTATTA TTATCACCGA TTACTGATAA TAATCCGATT
GCATTACAAA TTTTAGGTAT TTGTTCTGCG TTGGCGGTAA CAACCAAACT TGAAACAGCA
GTTGTTATGG CAATTGCGGT AAGTCTTGTT ACAGCTTTTT CAAGCTTTTT TATTTCTTTA
ATCCGTAATT ATATTCCGAA CAGTATTCGT ATAATTGTTC AAATGGCAAT TATTGCTTCG
TTAGTAATTT TGGTTGATCA AATTTTACGT GCGTATGCTT ATGGGTTATC AAAACAACTT
TCAGTTTTTG TGGGGTTGAT TATCACAAAC TGTATCGTGA TGGGACGTGC GGAGGCTTTT
GCAATGAAAT CTGCACCAAT AGAAAGTTTT GTTGACGGTA TTGGTAATGG TTTAGGCTAT
GGAGCAATTT TAGTTACTGT CGCTTTTATT CGAGAATTAA TTGGTTCAGG TAAATTATTT
GGTATGACTA TTTTTCAAAC TATCCAAGAT GGTGGATGGT ATCAAACCAA TGGTTTATTC
TTATTAGCAC CAAGTGCATT CTTTATTATC GGTTTCATTA TTTGGGGTCT GAGAACATGG
AAACCGGAAC AGGTGGAGAA ATAA
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| Protein sequence | MANANIKKLL LSPITDNNPI ALQILGICSA LAVTTKLETA VVMAIAVSLV TAFSSFFISL
IRNYIPNSIR IIVQMAIIAS LVILVDQILR AYAYGLSKQL SVFVGLIITN CIVMGRAEAF
AMKSAPIESF VDGIGNGLGY GAILVTVAFI RELIGSGKLF GMTIFQTIQD GGWYQTNGLF
LLAPSAFFII GFIIWGLRTW KPEQVEK
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