Gene HS_1679 details

Gene Information

• Locus tag: HS_1679
• ID: 4241206
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 1907757
• End bp: 1908410
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 638105265
• Product: transposase
• Protein accession: YP_719884
• Protein GI: 113461815
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3676] Transposase and inactivated derivatives

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATAA CTCATTGTAA ATTAAAGAAA TCTATACAGA AAAAGCTCCT TGAGTTTTTT 
GTGTTAGAAG TGACAGCTCG ATCAGCAGCT AATATTTTAG GTATCAATCC AAATTCAAGT 
GCCTTGTTTT ATCGTAAAAT TCGTGAAGTC ATCAGCTATC ATTTAGCCCT TGAAGCCGAT 
GATGTTTTTG ATGGACAGAT TGAGCTTGAT GAAAGCTATT TTGGTGGTCA TCGTAAAGGA 
AAACGAGGGC GTGGAGCAAC CGGTAAAGTG GCTGTTTTTG GCTTGTTAAA ACGACAGGGA 
AAGGTATTTA CGGTGGTGGT AGAAAATACC AAAACAGAAA CGATAATGCC TGTAATCACA 
AGGAAAATCA AGCCTGACAG TTGGGTTTAT ACCGATACAT ATCGTAGCTA TGATGCTCTT 
GATGTGAGCC AATTTCACCA CGAACGCATC AATCATTCGG AGTTGTTTGC AGTGAAAGAA 
AATCACATCA ACGGTATAGA AAACTTTTGG AGTCAAGCCA AACGGATACT CCGAAAATAT 
AATGGAATTG ACCGAAAAAA CTTTCCTTTG TTCTTGAAGG AATGTGAATT TCGGTTTAAC 
TTTGGAACAC CAAAAGAGCA GTTAAAAACA TTGCGAAAAT GGTGTGGAAT TTAG 

 

Protein sequence

MKITHCKLKK SIQKKLLEFF VLEVTARSAA NILGINPNSS ALFYRKIREV ISYHLALEAD 
DVFDGQIELD ESYFGGHRKG KRGRGATGKV AVFGLLKRQG KVFTVVVENT KTETIMPVIT 
RKIKPDSWVY TDTYRSYDAL DVSQFHHERI NHSELFAVKE NHINGIENFW SQAKRILRKY 
NGIDRKNFPL FLKECEFRFN FGTPKEQLKT LRKWCGI