Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1672 |
Symbol | torC |
ID | 4241199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 1901844 |
End bp | 1903013 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638105258 |
Product | cytochrome c-type protein |
Protein accession | YP_719877 |
Protein GI | 113461808 |
COG category | [C] Energy production and conversion |
COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
TIGRFAM ID | [TIGR02162] trimethylamine-N-oxide reductase c-type cytochrome TorC |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATAT TTAAATCAAT AAAACAATTC TTTGTTAAGC CATCTGCAAA AATAGGGTTA GGTATCCTTT TGGTCGGCGG TGCCTTTGCA GGAATTGTAG GTTGGATTAT CTTTAATGCC ATTCTTGACC ATACCAGTCA AGAAGAATTT TGTATAAGCT GCCATTCTAT GCAATATCCA TTAGAAGAAC TCAAACAAAC CGCTCATTGG TCCAATGATA AAGGGGTTTC CGCAAGTTGC CCTGATTGTC ATTTACCTCA CAATACGGTG GATAAATATA TTCGTAAGAT TCAAGCAACA AAGGAAATTT TTGCCGAATT AAGCGGTAAA ATTTCTTCGA AAACAGACTT TGAAAAACAC CGTCTAGAAA TGGCAGAAAG GGAATGGGCG AGAATGTCCG CTAACGGTTC GGCGGAATGT AAAGCTTGTC ACAGCTATGA TCGAATGGAT TTTGATAAAA TGTCGGAGAT TGCACGCAAT GCCATGATAC CTGCAGCTGA AAAAGATCAA AGCTGTATTG ATTGCCATAA AGGAATTGCA CATCATCTTC CTGAAATGTC ACATTCATCA TCAAAAGGCA ATGGTTTACC ATCAAACTCT TTACAAGCAA ATAAAATCTA TTATACGGAA AATAATGTCG CTCTTTTTGC AGATGAAACA ATGGGGCAAG AAATCGGGCA GTTAGAAACT GGTGTACCAG TACATTTTGT GAAAACAACA CCAAACGCGG ATTTAGTTGA ACTGGAAATG TGGCGAAAAG ACAAAGGCTT TGGACGAATT TGGTATAACC AATTCGGAAA AAATATAACC GATGCCATAC TAACAAAAGA ATTTATGTCT GCAGAACCTA AATATGATGT ATTAGAAAGT ATTGAAGATC CTATTACCGG TCTAACTTGG CAAAAAGTAA AACTTTCTGT ATGGATTGGT AAAAATCAAC TTATTGAAAA TATTGATAAT TTATGGGCTG AAGCGGAAAA AATTTATAAA ACACAATGCA GTACTTGTCA TAGACAACCT GATGTAAAAC ATTTTGATTC AAATACTTGG ATTGGGCTGT TTAATGGTAT GGTCGGTTTT ACTAATATTG ATAAACCAAC AGGAAAACGT GTTTTACGCT ATTTGCAGAT GCATTCATCT GATTTTCAAC CGCACGATAA TAATCATTAA
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Protein sequence | MRIFKSIKQF FVKPSAKIGL GILLVGGAFA GIVGWIIFNA ILDHTSQEEF CISCHSMQYP LEELKQTAHW SNDKGVSASC PDCHLPHNTV DKYIRKIQAT KEIFAELSGK ISSKTDFEKH RLEMAEREWA RMSANGSAEC KACHSYDRMD FDKMSEIARN AMIPAAEKDQ SCIDCHKGIA HHLPEMSHSS SKGNGLPSNS LQANKIYYTE NNVALFADET MGQEIGQLET GVPVHFVKTT PNADLVELEM WRKDKGFGRI WYNQFGKNIT DAILTKEFMS AEPKYDVLES IEDPITGLTW QKVKLSVWIG KNQLIENIDN LWAEAEKIYK TQCSTCHRQP DVKHFDSNTW IGLFNGMVGF TNIDKPTGKR VLRYLQMHSS DFQPHDNNH
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