Gene HS_1672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1672 
SymboltorC 
ID4241199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1901844 
End bp1903013 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content36% 
IMG OID638105258 
Productcytochrome c-type protein 
Protein accessionYP_719877 
Protein GI113461808 
COG category[C] Energy production and conversion 
COG ID[COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit 
TIGRFAM ID[TIGR02162] trimethylamine-N-oxide reductase c-type cytochrome TorC 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATAT TTAAATCAAT AAAACAATTC TTTGTTAAGC CATCTGCAAA AATAGGGTTA 
GGTATCCTTT TGGTCGGCGG TGCCTTTGCA GGAATTGTAG GTTGGATTAT CTTTAATGCC
ATTCTTGACC ATACCAGTCA AGAAGAATTT TGTATAAGCT GCCATTCTAT GCAATATCCA
TTAGAAGAAC TCAAACAAAC CGCTCATTGG TCCAATGATA AAGGGGTTTC CGCAAGTTGC
CCTGATTGTC ATTTACCTCA CAATACGGTG GATAAATATA TTCGTAAGAT TCAAGCAACA
AAGGAAATTT TTGCCGAATT AAGCGGTAAA ATTTCTTCGA AAACAGACTT TGAAAAACAC
CGTCTAGAAA TGGCAGAAAG GGAATGGGCG AGAATGTCCG CTAACGGTTC GGCGGAATGT
AAAGCTTGTC ACAGCTATGA TCGAATGGAT TTTGATAAAA TGTCGGAGAT TGCACGCAAT
GCCATGATAC CTGCAGCTGA AAAAGATCAA AGCTGTATTG ATTGCCATAA AGGAATTGCA
CATCATCTTC CTGAAATGTC ACATTCATCA TCAAAAGGCA ATGGTTTACC ATCAAACTCT
TTACAAGCAA ATAAAATCTA TTATACGGAA AATAATGTCG CTCTTTTTGC AGATGAAACA
ATGGGGCAAG AAATCGGGCA GTTAGAAACT GGTGTACCAG TACATTTTGT GAAAACAACA
CCAAACGCGG ATTTAGTTGA ACTGGAAATG TGGCGAAAAG ACAAAGGCTT TGGACGAATT
TGGTATAACC AATTCGGAAA AAATATAACC GATGCCATAC TAACAAAAGA ATTTATGTCT
GCAGAACCTA AATATGATGT ATTAGAAAGT ATTGAAGATC CTATTACCGG TCTAACTTGG
CAAAAAGTAA AACTTTCTGT ATGGATTGGT AAAAATCAAC TTATTGAAAA TATTGATAAT
TTATGGGCTG AAGCGGAAAA AATTTATAAA ACACAATGCA GTACTTGTCA TAGACAACCT
GATGTAAAAC ATTTTGATTC AAATACTTGG ATTGGGCTGT TTAATGGTAT GGTCGGTTTT
ACTAATATTG ATAAACCAAC AGGAAAACGT GTTTTACGCT ATTTGCAGAT GCATTCATCT
GATTTTCAAC CGCACGATAA TAATCATTAA
 
Protein sequence
MRIFKSIKQF FVKPSAKIGL GILLVGGAFA GIVGWIIFNA ILDHTSQEEF CISCHSMQYP 
LEELKQTAHW SNDKGVSASC PDCHLPHNTV DKYIRKIQAT KEIFAELSGK ISSKTDFEKH
RLEMAEREWA RMSANGSAEC KACHSYDRMD FDKMSEIARN AMIPAAEKDQ SCIDCHKGIA
HHLPEMSHSS SKGNGLPSNS LQANKIYYTE NNVALFADET MGQEIGQLET GVPVHFVKTT
PNADLVELEM WRKDKGFGRI WYNQFGKNIT DAILTKEFMS AEPKYDVLES IEDPITGLTW
QKVKLSVWIG KNQLIENIDN LWAEAEKIYK TQCSTCHRQP DVKHFDSNTW IGLFNGMVGF
TNIDKPTGKR VLRYLQMHSS DFQPHDNNH