| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1629 |
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| Symbol | spoU |
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| ID | 4241156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 1855857 |
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| End bp | 1856342 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638105215 |
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| Product | tRNA/rRNA methyltransferase |
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| Protein accession | YP_719834 |
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| Protein GI | 113461765 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
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| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAGACA TCGTACTGTA TGAACCGGAA ATTCCCCAAA ATACGGGAAA TATTATTCGC
CTATGTGCCA ATACGGGTTT TCGTTTACAT TTAATCGAAC CCTTAGGATT TACTTGGGAC
GATAAAAAAT TACGCCGTTC AGGTTTGGAT TATCATGAAT TTGCACAAAT CAAAAAGCAT
AAAACTTTTA ATGAATTTCT AAACACAGAA CAACCTAACC GTCTTTTTGC ACTCACAACA
AAAGGTACAC CTGCACATAG CCAAGTAAAT TTTGAGTTGG GCGATTATCT TATGTTCGGT
CCGGAAACTA GAGGTATCCC AATGTCAATT TTAGATAACT TACCGACAAC ACAAAAAATT
CGTATTCCAA TGATAGAAAA TAGCCGTAGC ATGAATTTAT CCAATGCTGT TGCGGTTACT
GTCTATGAAG CATGGCGACA ATTAAATTAT ATCAACGCAA TGAGTTTATC CCCACTCCCT
AAATAA
|
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| Protein sequence | MLDIVLYEPE IPQNTGNIIR LCANTGFRLH LIEPLGFTWD DKKLRRSGLD YHEFAQIKKH
KTFNEFLNTE QPNRLFALTT KGTPAHSQVN FELGDYLMFG PETRGIPMSI LDNLPTTQKI
RIPMIENSRS MNLSNAVAVT VYEAWRQLNY INAMSLSPLP K
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