Gene HS_1620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1620 
Symbollgt 
ID4241147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1845184 
End bp1845996 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content40% 
IMG OID638105206 
Productprolipoprotein diacylglyceryl transferase 
Protein accessionYP_719825 
Protein GI113461756 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0682] Prolipoprotein diacylglyceryltransferase 
TIGRFAM ID[TIGR00544] prolipoprotein diacylglyceryl transferase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACAT TTTTTCAAAT GCCCTATATT GATCCTGTCA TGTTTAGCTT AGGACCCGTC 
AGTTTACATT GGTATGGTGT TATGTATTTG CTCGGTTTTG GTTTTGCTTA TTGGCTCGGA
ATGGCTCGGG CGAAAAAATC AAATGGAGTA TGGACATCAG AACAACTTGA ACAATTATTA
TACAACGGAT TTTTTGGCGT TATTTTAGGC GGAAGAATCG GTGATGTGTT CTTTTACAAC
GTTGATAAGT TTTTTGCTGA TCCACTTTAT CTATTTCGTA TTTGGGAAGG TGGAATGTCT
TTCCACGGTG GATTAATCGG CGTCATTCTC GCAATGATTT GGACATCTCG TCGCCAACGT
CGCTGTTTTT GGCAGACCGC AGATTTTGTT GCTCCTTTAA TTCCTTTCGG TTTAGGCATG
GGAAGAATTG GTAACTTTAT TAACAGCGAA TTATGGGGAA GAGTAACAGA TGTACCTTGG
GCAATCATTC CTTACGCTTC AACCACACCT CGACATCCAT CTCAACTCTA TGAAGCCTTT
TTAGAAGGTT TCATTTTATT AATCATCTTA AATCTCTATA TTCGCAAACC ACGCCCAACC
GGTTCCGTAG CAGGATTGTT TTTAATCGGC TATGGTATCT TCCGTTTCCT AGTGGAATAT
GTACGAGAAA TTGATCACAA CGTAAATACC ATTGATGACC TTCTCACTCG AGGGCAATTA
CTCTGTTTAC CAATGATATT CGGTGGACTT GCCGTGATGA TTTGGTCTTA TTCTCGTTCA
AAGGCAAATA AAAGTGCGGT TAAAAAAGGG TAA
 
Protein sequence
MNTFFQMPYI DPVMFSLGPV SLHWYGVMYL LGFGFAYWLG MARAKKSNGV WTSEQLEQLL 
YNGFFGVILG GRIGDVFFYN VDKFFADPLY LFRIWEGGMS FHGGLIGVIL AMIWTSRRQR
RCFWQTADFV APLIPFGLGM GRIGNFINSE LWGRVTDVPW AIIPYASTTP RHPSQLYEAF
LEGFILLIIL NLYIRKPRPT GSVAGLFLIG YGIFRFLVEY VREIDHNVNT IDDLLTRGQL
LCLPMIFGGL AVMIWSYSRS KANKSAVKKG