Gene HS_1617 details

Gene Information

• Locus tag: HS_1617
• Symbol: uvrB
• ID: 4241144
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 1841800
• End bp: 1843833
• Gene Length: 2034 bp
• Protein Length: 677 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 638105203
• Product: excinuclease ABC subunit B
• Protein accession: YP_719822
• Protein GI: 113461753
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0556] Helicase subunit of the DNA excision repair complex
• TIGRFAM ID: [TIGR00631] excinuclease ABC, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAAAA TTAACAGTAA GCCTTTTATT TTACATTCCG ACTTTCAACC TTCTGGTGAT 
CAGCCACAAG CTATTGCAAA TTTAGTGGAG AATCTGAATG ATGGGTTAGC ACATCAAACA 
TTGCTTGGCG TTACCGGATC AGGTAAAACC TTTACGATTG CCAATGTCAT TGCGAAATTG 
AATCGTCCTG CTATGGTGTT GGCTCCTAAT AAAACTTTGG CTGCTCAACT TTATGCGGAA 
ATGAAGGCTT TTTTTCCGGA AAATGCGGTG GAATATTTTG TTTCTTATTA TGATTATTAT 
CAGCCGGAAG CTTATGTGCC GAGTAGTGAT ACGTTTATTG AAAAAGATGC TTCGATTAAT 
GATCAAATTG AGCAAATGCG TTTGTCTGCG ACTAAATCTT TTCTTGAGCG GCGAGACACG 
ATTGTGGTCG CTTCTGTTTC TGCGATTTAT GGTTTAGGCG ATCCGGATAG CTATTTGAAA 
ATGATGTTGC ATTTGCAACA TGGTGCGATT GTTGATCAAC GCCAAATTTT GGCGAAATTG 
GCGGAATTAC AATACACCCG CAATGATCAG GTTTTTCAAC GAGGGACATT TAGAGTGCGG 
GGAGAAATTA TTGATATTTT TCCGGCTGAA TCTGATGATC GAGCAGTGCG TATTGAGTTA 
TTTGACGATG AAATTGAGCG TTTGAGTTTA TTTGATCCAC TGACCGGAGC GAATTTTGGT 
GCGATACCTC GCTATACTAT TTATCCTAAA ACGCATTATG TTACACCTCG AGAACGTATT 
TTAGAGGCGA TTGAAAAAAT TAAGTTGGAA CTTCAGGCAC GTCGTGAATA TTTGTTGGCA 
AATAATCGCC TTGTAGAGGA ACAACGATTA ACTCAGCGAA CTCAATTTGA TATTGAGATG 
ATGAATGAGT TGGGATATTG TTCGGGGATT GAAAATTACT CACGTTATTT ATCAGGGCGA 
GATGAGGGGG AGCCGCCACC AACGTTATTT GATTATATTC CAAGTGATGG TTTGTTAATT 
ATTGATGAAA GCCATGTCAC TGTTCCGCAA ATAGGCGGTA TGTATCGTGG CGACCGTTCA 
CGCAAAGAAA CGCTTGTGGA ATACGGTTTT CGTTTGCCTT CGGCGTTGGA TAATCGCCCA 
TTACGTTTTG AAGAATTTGA GCGTTTAGCA CCGCAGACTA TCTACGTTTC GGCAACACCG 
GGGCCTTATG AATTGGAAAA ATCGGGCGAT GAAATTATTG ATCAGGTTGT GAGACCTACC 
GGTTTACTCG ATCCGGAAGT GGAGATACGT CCTGTAGCGA TTCAAGTTGA TGATTTGTTA 
TCGGAAGCAA GGAAAAGAGC GGAGCAAAAT GAGCGAGTTT TGGTCACCAC GTTAACCAAA 
CGTATGGCGG AAGATCTCAC GGATTATTTA GAAGAACATG GGATTCGGGT TCGTTATTTA 
CATTCAGATA TTGATACCGT TGAACGTGTT GAAATTATTC GTGATTTGCG TTTAGGTGAA 
TTTGATGTAT TAGTTGGGAT TAACTTACTG CGAGAGGGGT TGGATATTCC GGAAGTTTCC 
TTAGTTGCGA TTTTAGATGC CGATAAAGAG GGGTTTCTTC GTTCTGAACG TTCTCTTATT 
CAGACTATCG GTCGTGCGGC ACGAAATTTA AACGGAAAAG CGATTTTATA CGCAGACAGC 
ATAACAAAAT CTATGCAAAA AGCGATTGAT GAAACTCATC GTCGGCGAGA AAAACAAATG 
AAATACAATG CGGAAAAAGG CATTGTGCCA CAGGCTTTAA ATAAAAAAGT GGGCGAATTA 
CTGGATATTG GGCAAGGTGC TATAACGAAA AGTAAAACAA AGGCTCGTGC TAAAACTGTG 
GCGGAATCGT CCGCACTTTA TCAAAAAATA AATTCGCCTA AGGACTATCA ACAACAAGTG 
AAAAAACTTG AGCAACAGAT GTATAAATTT GCCCAAGATT TAGAATTTGA AAAAGCGGCT 
GCAATTAGAG ATCAGTTACA AGAATTAAAG GAAAGGTTTA AAGTTGGGCT TTAA 

 

Protein sequence

MSKINSKPFI LHSDFQPSGD QPQAIANLVE NLNDGLAHQT LLGVTGSGKT FTIANVIAKL 
NRPAMVLAPN KTLAAQLYAE MKAFFPENAV EYFVSYYDYY QPEAYVPSSD TFIEKDASIN 
DQIEQMRLSA TKSFLERRDT IVVASVSAIY GLGDPDSYLK MMLHLQHGAI VDQRQILAKL 
AELQYTRNDQ VFQRGTFRVR GEIIDIFPAE SDDRAVRIEL FDDEIERLSL FDPLTGANFG 
AIPRYTIYPK THYVTPRERI LEAIEKIKLE LQARREYLLA NNRLVEEQRL TQRTQFDIEM 
MNELGYCSGI ENYSRYLSGR DEGEPPPTLF DYIPSDGLLI IDESHVTVPQ IGGMYRGDRS 
RKETLVEYGF RLPSALDNRP LRFEEFERLA PQTIYVSATP GPYELEKSGD EIIDQVVRPT 
GLLDPEVEIR PVAIQVDDLL SEARKRAEQN ERVLVTTLTK RMAEDLTDYL EEHGIRVRYL 
HSDIDTVERV EIIRDLRLGE FDVLVGINLL REGLDIPEVS LVAILDADKE GFLRSERSLI 
QTIGRAARNL NGKAILYADS ITKSMQKAID ETHRRREKQM KYNAEKGIVP QALNKKVGEL 
LDIGQGAITK SKTKARAKTV AESSALYQKI NSPKDYQQQV KKLEQQMYKF AQDLEFEKAA 
AIRDQLQELK ERFKVGL