| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1613 |
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| Symbol | rfaD |
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| ID | 4241140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 1827809 |
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| End bp | 1828738 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638105199 |
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| Product | ADP-L-glycero-D-mannoheptose-6-epimerase |
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| Protein accession | YP_719818 |
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| Protein GI | 113461749 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTATTG TTACAGGTGG AGCAGGATTA ATTGGAAGTA ATATCATTGC GGCATTAAAC
GATATGGGAC GTCGAGATAT TTTGGTAGTG GACAACCTGA CTGATGGGAC AAAATTTGTC
AATTTGGTCG ATTTGGATAT TGCGGATTAT TGTGATAAAG AAGATTTTAT TGCCTCTATC
ATTGCCGGTG ATGATTTTGG AGATATTGAT GCAATTTTCC ATCAAGGCGC TTGTTCTGCT
ACAACAGAAT GGAACGGTAA ATATTTAATG CAAAATAATT ATGAATATTC AAAAGAACTA
TTGCATTATT GTCTATTACG TGAAATTCCT TTCTTTTATG CCTCAAGTGC GGCGACTTAT
GGCGATAAAA CAGACTTTAT TGAAGAACGC CAATTTGAAG GTCCGTTAAA TGTTTATGGC
TATTCAAAAT TCCTATTTGA TGAATACGTG CGTCAAATTC TGCCACAGGC TACGTCGCCT
GTTTGTGGGT TCAAATATTT CAATGTATAT GGTCCTCGTG AACAACATAA GGGTTCGATG
GCAAGTGTTG CATTCCATTT AAATAATCAG ATGTTGAAAG GAGAAAATCC AAAATTATTT
GCAGGATCAG AGCATTTTTT GCGTGATTTT GTTTATGTGG GCGATGTGGC AAAAGTGAAT
TTGTGGGCAT GGCAACATGG TATTTCAGGC ATTTATAATT GTGGAACAGG TAGAGCGGAA
AGTTTTGAAC AAGTAGCAAG AGCAGTGTTG AATTATCATG GCAAAGGTGA AATTGAAACT
ATTCCATTCC CTGAGCATTT AAAATCACGT TATCAAGAAT ATACACAAGC TAATTTAACA
AAATTACGTG CCGCTGGTTA TCAAGCAGAA TTTAAGTCGG TTGCCGAAGG TGTGGCGGAA
TATATGCAAT GGTTAAATCG CAAGTCTTGA
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| Protein sequence | MIIVTGGAGL IGSNIIAALN DMGRRDILVV DNLTDGTKFV NLVDLDIADY CDKEDFIASI
IAGDDFGDID AIFHQGACSA TTEWNGKYLM QNNYEYSKEL LHYCLLREIP FFYASSAATY
GDKTDFIEER QFEGPLNVYG YSKFLFDEYV RQILPQATSP VCGFKYFNVY GPREQHKGSM
ASVAFHLNNQ MLKGENPKLF AGSEHFLRDF VYVGDVAKVN LWAWQHGISG IYNCGTGRAE
SFEQVARAVL NYHGKGEIET IPFPEHLKSR YQEYTQANLT KLRAAGYQAE FKSVAEGVAE
YMQWLNRKS
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