Gene HS_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1602 
SymboluxaC 
ID4241129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1818628 
End bp1820019 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content39% 
IMG OID638105188 
Productglucuronate isomerase 
Protein accessionYP_719807 
Protein GI113461738 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1904] Glucuronate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGAAG ATTTTTTACT ATCAACCTCA ACGGCTCAAA AGCTTTATCA TGATTATGCT 
GAAGAACAAC CGATTTTTGA CTATCACTGC CATTTAAACC CAAAAGAGAT TGCAGAAAAT
CGCCAATTTA ATGATTTAGC TGAAATTTGG TTAGAGGGCG ATCACTACAA ATGGCGAGCA
ATGCGTTCAG CCGGGGTGGA AGAGCATTTA ATTACGGGAA GTGCAGATAA ATACAGTAAA
TATCTCGCAT TCGCTAACAC TGTACCAAAA TGTATCGGTA ACCCGATTTA TCACTGGACT
CACTTAGAAT TACGTCGTCC GTTCGGTATT ACCGACACGA TTTTTTCACC TGAAACAGCG
GAGAAAATTT GGCATAAAGG GAAAGAGTTA TTGCAACAGC CTGAGTTTTC AGCACGTGGT
ATTATGAAAA AAATGAATGT AAATTTGGTT GGTACAACCG ATGATCCTAT TGATTCATTG
GAATACCATA AAGCCATTGC AGAAGATGAT ACCTTTGATG TTGAGGTTGT ACCAAGTTTC
CGACCTGACC GTGCGTTTAA AATTGAGCTT CCTCTGTTCA ATGATTATAT TGAGCAGTTA
GGAAAAGTCG CAGATATTGA AATCAACACT TTCGATAAAC TAAAACAGGC TCTATCGAAA
CGTATTGAAC ATTTCGATAA ATATGGTTGT AAATCTGCTG ATCATGGTAT GGAAATTGTC
CGTTTCTCAC CAATTCCTGA TGAGAAAACT CTTGATCAAA TATTGCAAAA AAGACTTAAC
AATCAACCTA TTGAAGAAGA AGAAATTGCA CAATTTAGCA CCGCACTATT AGTTTGGTTA
GGCACGGAGT ACCACAAACA CCATTGGGTA ATGCAGCTCC ATATCGGAGC AATTCGTAAC
AACAATACGA GAATGTTCAA ATTGCTAGGT GCAGATGCTG GATTTGATTC AATCGGAGAT
CGTGCGTTTG CTGAATCACT TTCTCGTTTA TTAGACAGCA TGGATCAAAC AGACCAACTC
CCGAAAACCA TTTTATACTG CTTAAATCCT CGTGATAACG AAATGCTTGG CACAATGATC
GGTAATTTCC AAACTGGGGG CATTGCAGGT AAAATTCAAT TCGGTTCAGG CTGGTGGTTC
AACGATCAAA AAGATGGCAT GGAACGCCAA CTGCAACAGC TATCACAATT GGGACTATTA
AGCCAATTTG TTGGTATGCT GACTGATTCT CGCAGTTTCT TATCTTACAC TCGCCACGAA
TATTTCCGCC GTATTTTATG TGAAATGATT GGTGGCTGGG TTGAACGTGG TGAAGCACCA
AATGATCTCA ACCTGCTAGG AAAGATGGTG AAAGACATTT GCTATGACAA TGCAAAACGT
TATTTCAAAT AA
 
Protein sequence
MTEDFLLSTS TAQKLYHDYA EEQPIFDYHC HLNPKEIAEN RQFNDLAEIW LEGDHYKWRA 
MRSAGVEEHL ITGSADKYSK YLAFANTVPK CIGNPIYHWT HLELRRPFGI TDTIFSPETA
EKIWHKGKEL LQQPEFSARG IMKKMNVNLV GTTDDPIDSL EYHKAIAEDD TFDVEVVPSF
RPDRAFKIEL PLFNDYIEQL GKVADIEINT FDKLKQALSK RIEHFDKYGC KSADHGMEIV
RFSPIPDEKT LDQILQKRLN NQPIEEEEIA QFSTALLVWL GTEYHKHHWV MQLHIGAIRN
NNTRMFKLLG ADAGFDSIGD RAFAESLSRL LDSMDQTDQL PKTILYCLNP RDNEMLGTMI
GNFQTGGIAG KIQFGSGWWF NDQKDGMERQ LQQLSQLGLL SQFVGMLTDS RSFLSYTRHE
YFRRILCEMI GGWVERGEAP NDLNLLGKMV KDICYDNAKR YFK