Gene HS_1596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1596 
SymboluxuA 
ID4241123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1811479 
End bp1812663 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content41% 
IMG OID638105182 
Productmannonate dehydratase 
Protein accessionYP_719801 
Protein GI113461732 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1312] D-mannonate dehydratase 
TIGRFAM ID[TIGR00695] mannonate dehydratase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.011047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAAA CATGGCGTTG GTATGGACCA AATGATCCGG TATCTTTGGA TGATGTAAGA 
CAGGCTGGAG CAACGGGAGT GGTGACTGCA TTGCATCATA TTCCCAACGG GCAAGTATGG
TCAGTTGAGG AAATCAATAA GCGTAAAGCA TTGTTGGAGG AAAAAGGGTT GGTTTGGTCA
GTTGTGGAAA GTGTACCTAT TCACGAAGAT ATCAAAACCC AAACAGGTAA CTATCAGCAA
TGGATTGATA ACTATAAGCA AACATTGCGT AATCTAGCGA GTTGTGGCAT TGACATAGTA
TGTTATAACT TTATGCCGGT GTTAGATTGG ACTCGTACCG ATCTTGAGTA TGAAATGCCA
GATGGTTCAA AAGCGTTACG TTTTGATCAA GTGGCTTTTG CTGCCTTTGA ACTATATATT
TTAAAACGTC CGGGAGCAGA GGAAACTTAC TCACCGGAAG AGCAAGCAGA AGCCAAAGCC
TATTTTGATC AAATGAGCGA AGCGGATATT GCGAAATTAA CAAAAAATAT TATTGCTGGG
TTACCGGGAT CTGAAGAGGG TTATACTCTT GAGGAATTTC AAGCACAACT TGATCGCTAT
AAAGGTATTT CTACAGAGAA ATTCCGCACT CATTTAGCCT ATTTCTTGAA TGAAATTGTG
CCTGTTGCAC AAGAAGTGGG AATCCGTATG GCTATTCACC CGGATGATCC TCCTCGTCCA
ATTCTCGGTT TGCCACGTAT TGTGTCAACT ATAGACGACA TGCAATGGTT TGTGGATACT
CAACCGCTTG CCGCTAATGG GTTCACTTTC TGTACTGGTT CATATGGTGT GTTAGCAGAA
AATGATTTAG TGAAAATGGC GGAAAAATTT GCTGATCGTA TTTACTTTGC TCATTTGCGA
TCCACTCAGC GGGAGGAAAA TCCACGAAGT TTTCACGAAG CTGATCACCT TGCCGGTGAT
GTAAATATGT TTGGAGTAAC GAAAGCATTA CTCACCGAAG AATATCGTCG CAAGGCAAAT
GGTGATAATC GCTTAATTCC AATGCGACCA GATCACGGTC ATCAAATGCT TGATGATTTG
AAGAAAAAAA CTAACCCGGG TTATTCTGCG ATTGGTCGTT TAAGAGGTTT GGCAGAATTT
CGTGGTTTAG AATTGGCATT AAAAAAAGTG TATTTTAATG ACTAA
 
Protein sequence
MEQTWRWYGP NDPVSLDDVR QAGATGVVTA LHHIPNGQVW SVEEINKRKA LLEEKGLVWS 
VVESVPIHED IKTQTGNYQQ WIDNYKQTLR NLASCGIDIV CYNFMPVLDW TRTDLEYEMP
DGSKALRFDQ VAFAAFELYI LKRPGAEETY SPEEQAEAKA YFDQMSEADI AKLTKNIIAG
LPGSEEGYTL EEFQAQLDRY KGISTEKFRT HLAYFLNEIV PVAQEVGIRM AIHPDDPPRP
ILGLPRIVST IDDMQWFVDT QPLAANGFTF CTGSYGVLAE NDLVKMAEKF ADRIYFAHLR
STQREENPRS FHEADHLAGD VNMFGVTKAL LTEEYRRKAN GDNRLIPMRP DHGHQMLDDL
KKKTNPGYSA IGRLRGLAEF RGLELALKKV YFND