Gene HS_1575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1575 
Symbol 
ID4241102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1787321 
End bp1788058 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content39% 
IMG OID638105161 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_719780 
Protein GI113461711 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.214687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTATTC CTCGAATTTA TCATCCAACC TCTTTAGAAA ATCAACAAAC TTGTCAATTA 
AGCGATGATG CGGCAAATCA TGTAGGGCGT GTTCTACGCA TGCAGGTAGG TGAGCAAATT
GAATTATTTG ACGGAAGTAA CCATATTTAC CCTGCCATTA TTACTCAAAC AAATAAAAAA
GCAATTGAAG TTAACATTCT CTCTCGTCAA TTGGACAATC GTGAAAGTCC ATTATTTATT
CATCTAGGTC AAGTGATTTC TCGTGGAGAA AGAATGGAGT TTACTATTCA AAAATCCGTT
GAGTTAGGGG TCAACATAAT TACGCCATTA TGGTCTGAAC GTTGTGGAGT AAAACTTGAT
AAGGATCGTA TGGAGAAAAA AATCCAACAA TGGCAAAAAA TTGCGATTTC CGCTTGTGAA
CAATGTGGGC GTAATATAGT GCCTGAAATT CGCCCATTAA TGAAATTGCA AGATTGGTGT
GCTGAACAAG ACGGAACCTT AAAGCTTAAT CTTCACCCAA GAGCTAAATA TACAATTCGT
ACCTTACCTG AAATTCCCCC ACAAGGTGTT CGCTTGTTAA TAGGTCCAGA AGGAGGACTT
TCTGCACAAG AAATTAGTCA AACAGAAACT CAGGGATTTA CTGAAATTTT ACTTGGTAAG
CGTGTTCTAC GTACAGAAAC TGCCGCACTT AGTGCAATCA CCGCATTACA GGTCTGTTTC
GGAGATTTGG CAACGTAA
 
Protein sequence
MRIPRIYHPT SLENQQTCQL SDDAANHVGR VLRMQVGEQI ELFDGSNHIY PAIITQTNKK 
AIEVNILSRQ LDNRESPLFI HLGQVISRGE RMEFTIQKSV ELGVNIITPL WSERCGVKLD
KDRMEKKIQQ WQKIAISACE QCGRNIVPEI RPLMKLQDWC AEQDGTLKLN LHPRAKYTIR
TLPEIPPQGV RLLIGPEGGL SAQEISQTET QGFTEILLGK RVLRTETAAL SAITALQVCF
GDLAT