Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1575 |
Symbol | |
ID | 4241102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 1787321 |
End bp | 1788058 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638105161 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_719780 |
Protein GI | 113461711 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.214687 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTATTC CTCGAATTTA TCATCCAACC TCTTTAGAAA ATCAACAAAC TTGTCAATTA AGCGATGATG CGGCAAATCA TGTAGGGCGT GTTCTACGCA TGCAGGTAGG TGAGCAAATT GAATTATTTG ACGGAAGTAA CCATATTTAC CCTGCCATTA TTACTCAAAC AAATAAAAAA GCAATTGAAG TTAACATTCT CTCTCGTCAA TTGGACAATC GTGAAAGTCC ATTATTTATT CATCTAGGTC AAGTGATTTC TCGTGGAGAA AGAATGGAGT TTACTATTCA AAAATCCGTT GAGTTAGGGG TCAACATAAT TACGCCATTA TGGTCTGAAC GTTGTGGAGT AAAACTTGAT AAGGATCGTA TGGAGAAAAA AATCCAACAA TGGCAAAAAA TTGCGATTTC CGCTTGTGAA CAATGTGGGC GTAATATAGT GCCTGAAATT CGCCCATTAA TGAAATTGCA AGATTGGTGT GCTGAACAAG ACGGAACCTT AAAGCTTAAT CTTCACCCAA GAGCTAAATA TACAATTCGT ACCTTACCTG AAATTCCCCC ACAAGGTGTT CGCTTGTTAA TAGGTCCAGA AGGAGGACTT TCTGCACAAG AAATTAGTCA AACAGAAACT CAGGGATTTA CTGAAATTTT ACTTGGTAAG CGTGTTCTAC GTACAGAAAC TGCCGCACTT AGTGCAATCA CCGCATTACA GGTCTGTTTC GGAGATTTGG CAACGTAA
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Protein sequence | MRIPRIYHPT SLENQQTCQL SDDAANHVGR VLRMQVGEQI ELFDGSNHIY PAIITQTNKK AIEVNILSRQ LDNRESPLFI HLGQVISRGE RMEFTIQKSV ELGVNIITPL WSERCGVKLD KDRMEKKIQQ WQKIAISACE QCGRNIVPEI RPLMKLQDWC AEQDGTLKLN LHPRAKYTIR TLPEIPPQGV RLLIGPEGGL SAQEISQTET QGFTEILLGK RVLRTETAAL SAITALQVCF GDLAT
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