| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1573 |
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| Symbol | speF |
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| ID | 4241100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 1783677 |
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| End bp | 1785836 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638105159 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_719778 |
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| Protein GI | 113461709 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAAAT TAAAAATCGC ACATAGCCCA TTAGTGCAAA AATATTTTAC ATCAACTCGT
GAATTAGTTT TATTAAATCA AACTGATTTC ACCGATATAG GTGCAATAAT ATTGACTGCC
GAAGATGTTA AGTATATTCA ACAAATAAAA ACGACTGAAT TTAATATTCC TATTTTTGTC
GTATTAAATG AAGGTGAAAC ACTTTCTGAT GAATATTTTG ATCAGGTTTA TCATGTTCAA
GATCTAAACA GCTATGATAT CAATTTGTAT AGCCGTCAAA TTGAAACAGC TGCGTCTCTT
TATGAGCAAA AAATGTTACC TCCATTCTTT AAAATGTTAA GCGAATATGT CGAAATGGGT
AATTTGGCAT TTGATTGTCC GGGACACCAA GGCGGTCAAT ATTTCCGCAA ACATCCAGCC
GGCCGTTATC TATACGATTT CTATGGAGAA AATATTTTCC GTTCAGATAT TTGTAATGCT
GATGTGAAAT TGGGAGATTT ACTAATACAT GAGGGTGCTC CATGTGATGC TCAACAACAT
GCGGCAAAAG TATATAATGC AGATAAAACA TATTTTGTGC TAAACGGAAC TTCCGCCTCC
AATAAAGTGG TTTGTAACGC ACTACTTGCA CCGGGTGATC TAGTATTATT TGACCGCAAC
AATCACAAAT CAAATCACCA CGGTGCTTTA ATTCAAGCGG GTGCAACCCC TGTTTACTTG
GAAACTGCCC GTAATCCATT CGGCTTCATC GGCGGTATTG ATAACCACTG TTTTGAAGAA
GCATATCTTA AAAAATTAAT CGCAGAAGTG GCACCGGAAA AACTTGAAGA GAAACGTCCT
TTCCGTCTTG CAATTATTCA ATTGGGTACT TATGACGGAA CAATTTATAA CGCCAAACAA
GTTGTTGAAC GTATTGGACA TTTATGCGAT TACATCTTGT TCGATTCTGC ATGGGTCGGC
TATGAACAAT TCATTCCAAT GATGAAAGAT TGCTCTCCAT TATTACTAGA TTTAAATGAA
AATGACCCTG GTATTATCGT GACACAATCG GTACATAAAC AACAAGCAGG TTTCTCACAA
ACATCACAAA TTCATAAAAA AGACAAACAT ATTAAAGGAC AAGCAAGATA TTGCAATCAC
AAACGCTTTA ATAATGCCTT TATGTTGCAT GCGTCTACCA GCCCATTCTA TCCTCTATTC
GCCACTCTGG ATGTAAACGC TCAAATTCAA GGTTCTCCTG CAGGGAAACG TCTATGGGCC
GAGTGTGTAG AAGTTGGTAT CGAGGCAAGA AAGTTAATGC TTAAGCACTG CACTTTAATC
AAACCATTTA TTCCTCCTTA TGTGAAAGGT AAAAAATGGC AAGATCACGA TACTAAAGAA
ATTGCAAATG ATCTTGAGTT TTTCAATTTC CATGCAAATG ATACATGGCA TAAATTTGAG
GGTTATACAG ATAATCAATA TTTTGTTGAC CCTTGTAAAT TCATGCTCAC AACTCCGGGG
ATTAACATTG AAACAGGGGA ATATGAAGAC TTTGGTATTC CAGCAACAAT CCTTGCTAAC
TTCTTGCGAG AAAATGGAAT CATTCCTGAA AAATGTGACT TGAACTCCAT TTTATTCTTG
CTTACACCGG CTGAAACATT GACAAAAATG CAAACTTTAG TTGCTCAAAT AGCTGCGTTT
GAAAAACATA TCAAACAAAA TTCATTACTC AAAGATGTAC TGCCTACTGT GTACAAAAAT
AATGAGGAAC GCTATCAGGG CTACACTATC AGACAATTAT GTCAAGAAAT GCACAATCTT
TACGTCAGTA GAAATGTTAA ACAGCTACAA CGTGACTTGT TTAGAAAAAC AACTCTACCG
GAATATGCTA TGAACCCACA AAAAGCGAAT ATCGAATTTG TTCGTAACAA AATTGAATTA
GTTCCATTGA CAGATATTGT GGGGAGAATC GCCGCCGAAG GTGCATTACC TTACCCTCCA
GGTGTTTTAT GTGTTGTTCC CGGTGAACGT TGGAGTACGA CAGTACAACA ATATTTCCTT
GCACTGGAAG AAGGCATTAA TGTTCTTCCT GGATTCGCAC CGGAAATTCA GGGCGTATAT
CTACAAAAAG ATCCTGATGG ACGTACACGT GCTTATGGAT ATGTATTAAC TGAAGCATAA
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| Protein sequence | MLKLKIAHSP LVQKYFTSTR ELVLLNQTDF TDIGAIILTA EDVKYIQQIK TTEFNIPIFV
VLNEGETLSD EYFDQVYHVQ DLNSYDINLY SRQIETAASL YEQKMLPPFF KMLSEYVEMG
NLAFDCPGHQ GGQYFRKHPA GRYLYDFYGE NIFRSDICNA DVKLGDLLIH EGAPCDAQQH
AAKVYNADKT YFVLNGTSAS NKVVCNALLA PGDLVLFDRN NHKSNHHGAL IQAGATPVYL
ETARNPFGFI GGIDNHCFEE AYLKKLIAEV APEKLEEKRP FRLAIIQLGT YDGTIYNAKQ
VVERIGHLCD YILFDSAWVG YEQFIPMMKD CSPLLLDLNE NDPGIIVTQS VHKQQAGFSQ
TSQIHKKDKH IKGQARYCNH KRFNNAFMLH ASTSPFYPLF ATLDVNAQIQ GSPAGKRLWA
ECVEVGIEAR KLMLKHCTLI KPFIPPYVKG KKWQDHDTKE IANDLEFFNF HANDTWHKFE
GYTDNQYFVD PCKFMLTTPG INIETGEYED FGIPATILAN FLRENGIIPE KCDLNSILFL
LTPAETLTKM QTLVAQIAAF EKHIKQNSLL KDVLPTVYKN NEERYQGYTI RQLCQEMHNL
YVSRNVKQLQ RDLFRKTTLP EYAMNPQKAN IEFVRNKIEL VPLTDIVGRI AAEGALPYPP
GVLCVVPGER WSTTVQQYFL ALEEGINVLP GFAPEIQGVY LQKDPDGRTR AYGYVLTEA
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