| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1565 |
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| Symbol | rpoB |
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| ID | 4241086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 1767183 |
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| End bp | 1771211 |
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| Gene Length | 4029 bp |
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| Protein Length | 1342 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638105145 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_719770 |
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| Protein GI | 113461701 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTTACT CCTATACCGA AAAAAAGCGT ATTCGTAAAA GCTTCGGCAA ACGTCCGCAA
GTTTTAAATG TACCTTATTT ATTAACAATT CAACTTGACT CTTTTGATAA ATTTATCCAA
AGAGATCCTG ACGGTCAGCA AGGTTTAGAA GCTGCATTCC GTTCTATATT TCCTATTGTC
AGTAACAATG GTAATACAGA ACTGCAGTAT GTCAGTTATC AATTAGGGGA ACCTGTTTTT
GATGTCAGAG AATGTCAAAT TCGAGGTACT ACTTATGCTG CATCATTACG TGTAAAATTA
CGCCTTGTTA GCTACGATAA AGATGCGGCA TCCGGCACGA TAAAAGACAT AAAAGAACAA
GAAGTTTATA TGGGAGAAAT CCCATTGATG ACCAGTAATG GTACTTTTGT CATCAATGGT
ACTGAGCGTG TTGTTGTATC ACAATTACAT CGGAGTCCAG GTGTATTTTT TGATAGTGAC
AAAGGAAAAA CCCATTCATC AGGCAAAGTA CTTTATAATG CAAGAATTAT TCCTTATCGT
GGTTCATGGT TGGATTTTGA ATTTGATCCG AAAGATAATT TATATGCTCG TATTGACCGT
CGTCGTAAAT TACCAGCTAC TATTATTTTA CGTGCATTAA ATTACACTAC CGAAGAAATT
TTGGATTTAT TCTTTGATAA GGTTTCGTTT GAGATCAAAG ATAATAAATT ACTAATGACT
TTAGTTCCTG AAAGATTGCG AGGTGAAACC GCATCTTTTG ATATTGAAGC GAATGGTAAA
GTGTATATTG AGCGTGGTCG CCGTATTACC GCTCGTCATA TTAAAGCATT AGAAAAAGAT
AAGATTACAC AAGTTGAAGT ACCGACAGAA TATATCGTAG GTAAAGTTTC AGCTAAAGAT
TATGTTGATT TAACAACAGG TGAGATTATT TGTCCGGCAA ATATGGAAAT TTCGTTAGAA
TTGTTAGAGA AATTATCACA AGCTGGTTAT AAAAACATTG AAACTTTATT TACCAACGAC
CTAGATTTTG GTCCGTACAT ATCTGAAACA TTACGTGTTG ATCCATCCTA TGATCGTCTA
AGTGCATTAG TTGAAATTTA TCGTATGATG CGTCCGGGAG AGCCACCAAC AAAAGAGGCG
GCAGAAGGTT TATTTGATAA CTTATTTTTC TCTTCCGAAC GTTATGATTT GTCAGCTGTA
GGTCGCATGA AATTCAACCG CTCTTTGGGC ATTGAAGACA CTACAGGTAG CGGTACATTG
AGCAAAGAAG ATATTGTTAA TGTAATGCGT AAATTGATTG ACATTCGTAA TGGGCGTGGT
GAAGTAGATG ATATTGACCA CTTAGGTAAT CGTCGTATTC GTTCAGTGGG TGAAATGGCT
GAAAATCAAT TCCGCATTGG TTTAGTCCGT GTAGAAAGAG CGGTAAAAGA ACGTCTTTCT
TTGGGCGATT TAGAGTCGGT TACACCACAA GATTTAATTA ATGCTAAACC TATTTCAGCA
GCAGTAAAAG AGTTCTTTGG CTCTTCACAA CTTTCTCAAT TCATGGATCA AAATAATCCG
TTATCAGAAG TTACTCATAA ACGTCGTATT TCTGCATTAG GTCCGGGTGG TTTAACACGT
GAACGTGCCG GCTTTGAGGT TCGAGATGTT CATGCAACGC ACTATGGTCG AGTTTGTCCA
ATTGAAACCC CTGAGGGGCC AAACATTGGT TTGATTAACT CGCTATCTGT TTATGCTCGT
ACTAATGATT ATGGTTTCTT AGAAACACCA TATCGTAAGG TAGTAAACGG TCAAGTTACA
GAAGAAATCG AATATTTATC TGCGATTGAA GAAGGTAAGT ATGTTATTGC ACAAGCAAAC
TCAAACCTTG ATGGTGAGCT TCGTTTTACC GATGCTTTCG TAACCTGTCG TGGGGAGCAT
GGTGAATCTG GGTTATACCG ACCGGAAGAA ATTCATTATA TGGATGTTTC TACTCAACAA
GTAGTGTCTG TTGCAGCAGC ATTAATTCCT TTTCTTGAAC ATGACGATGC AAACCGTGCA
TTAATGGGTG CAAACATGCA ACGTCAAGCA GTTCCAACCT TACGTGCTGA TAAACCGTTG
GTGGGAACAG GAATGGAAAA ACCTGTAGCA CTGGACTCTG GTGTAGCGGT GGTGGCAAAA
CGTGGAGGTA CTATCCAATA TGTTGATGCT TCTCGTATTG TTGTAAAAGT TAATGAAGAT
GAAACTATTG CGGGTGAAGC GGGGATTGAT ATTTACAACT TAATTAAATA TACCCGTTCA
AACCAGAATA CTTGTATTAA CCAAATTCCT TGTGTGCAAT TGGGAGAACC GATTGAACGT
GGTGAAATCT TAGCTGATGG ACCATCAACG GATCTCGGAG AACTTGCACT TGGTCAAAAT
ATGCGTGTTG CATTCATGCC TTGGAATGGT TATAACTTTG AAGACTCAAT GTTAGTGTCT
GAGCGTGTGG TACAGGAAGA CCGTTTCACT ACTATTCATA TTCAAGAATT ATCTTGCGTA
GCACGAGATA CTAAATTAGG TTCTGAAGAA ATTACCGCCG ATATTCCAAA TGTAGGTGAA
GCTGCGTTAA GTAAACTTGA TGAATCAGGG ATTGTTTACA TCGGTGCTGA GGTTAAAGGT
GGAGATATTC TTGTCGGTAA AGTAACACCT AAAGGCGAAA CCCAATTAAC TCCGGAAGAA
AAACTGCTAC GTGCTATTTT TGGTGAAAAA GCATCTGATG TTAAAGACTC TTCCTTGCGT
GTACCTAACG GCACATCAGG TACAGTCATT GATGTTCAAG TCTTCACTCG TGATGGTGTT
GAAAAAGATA AACGTGCATT AGAAATTGAA GAAATGCAAT TAAAACAGGC TAAAAAAGAT
CTTGTAGAGG AATTAGAGAT TTTAGAAGCC GGTTTGTTTG CTCGAGTACG TAATTTACTT
CTTTCCGGTG GTTTCAATGA TAAACAATTG GAAAACTTAG ACCGCACTCA ATGGTTAGAG
CAGACTTTAG TTGATGAAGA TAAACAAAAT CAATTAGAGC AACTTGCTGA ACAATACGAA
GAGTTACGTA AAGATTTCGA ACATAAACTT GAAATTAAGC GTAGTAAAAT TATCCAAGGT
GATGATTTAG CCCCGGGAGT ATTGAAAGTT GTCAAAGTTT ATCTTGCAGT AAAACGTCAA
ATTCAACCGG GTGATAAAAT GGCGGGTCGT CATGGTAACA AAGGGGTTAT CTCGAAAATT
AACCCTGTTG AAGATATGCC ATACGATGAA AACGGTCAAC CTGTTGATAT TGTCTTGAAC
CCGTTAGGGG TACCATCCCG TATGAATATC GGTCAGATTT TAGAAACTCA TTTGGGACTG
GCAGCTAAAG GCATTGGTGA TCAAATCAAC GCAATGATAA AACAAAAACA AGATGTTGAA
AAATTACGTG GCTATATCCA AAAAGCTTAT GATTTAGGAG ATGGTTCACA AAAAGTTGAT
CTTTCGACCT TTACTGACGA AGAAGTATTG CGTTTAGCAA AAAACTTGCG TAAAGGTATG
CCATTAGCAA CGCCGGTATT TGACGGTGCA CATGAGAAAG AAATCAAAGC GTTATTAGAA
TTAGGTGGGT TACCAACTTC CGGTCAAATT ACCCTGTTTG ATGGTCGTAC AGGTGAAAAA
TTTGAACGTC CTGTAACGGT AGGTTATATG TATATGCTGA AATTGAACCA TTTAGTTGAT
GATAAAATGC ATGCTCGTTC AACAGGTTCA TATAGTCTTG TTACTCAGCA GCCACTTGGT
GGTAAAGCAC AGTTTGGTGG TCAACGTTTC GGTGAGATGG AAGTATGGGC ACTGGAAGCA
TATGGTGCAG CCTATACATT ACAAGAAATG TTAACAGTGA AATCCGATGA TGTGAATGGT
CGTACGAAGA TGTATAAAAA CATCGTTGGA GGCACACACC AAATGGATCC AGGTACGCCA
GAATCTTTCA ATGTAATCAT GAAGGAAATT CGTTCATTAG GTATCAACAT TGATCTTGAT
GAAGAGTAA
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| Protein sequence | MVYSYTEKKR IRKSFGKRPQ VLNVPYLLTI QLDSFDKFIQ RDPDGQQGLE AAFRSIFPIV
SNNGNTELQY VSYQLGEPVF DVRECQIRGT TYAASLRVKL RLVSYDKDAA SGTIKDIKEQ
EVYMGEIPLM TSNGTFVING TERVVVSQLH RSPGVFFDSD KGKTHSSGKV LYNARIIPYR
GSWLDFEFDP KDNLYARIDR RRKLPATIIL RALNYTTEEI LDLFFDKVSF EIKDNKLLMT
LVPERLRGET ASFDIEANGK VYIERGRRIT ARHIKALEKD KITQVEVPTE YIVGKVSAKD
YVDLTTGEII CPANMEISLE LLEKLSQAGY KNIETLFTND LDFGPYISET LRVDPSYDRL
SALVEIYRMM RPGEPPTKEA AEGLFDNLFF SSERYDLSAV GRMKFNRSLG IEDTTGSGTL
SKEDIVNVMR KLIDIRNGRG EVDDIDHLGN RRIRSVGEMA ENQFRIGLVR VERAVKERLS
LGDLESVTPQ DLINAKPISA AVKEFFGSSQ LSQFMDQNNP LSEVTHKRRI SALGPGGLTR
ERAGFEVRDV HATHYGRVCP IETPEGPNIG LINSLSVYAR TNDYGFLETP YRKVVNGQVT
EEIEYLSAIE EGKYVIAQAN SNLDGELRFT DAFVTCRGEH GESGLYRPEE IHYMDVSTQQ
VVSVAAALIP FLEHDDANRA LMGANMQRQA VPTLRADKPL VGTGMEKPVA LDSGVAVVAK
RGGTIQYVDA SRIVVKVNED ETIAGEAGID IYNLIKYTRS NQNTCINQIP CVQLGEPIER
GEILADGPST DLGELALGQN MRVAFMPWNG YNFEDSMLVS ERVVQEDRFT TIHIQELSCV
ARDTKLGSEE ITADIPNVGE AALSKLDESG IVYIGAEVKG GDILVGKVTP KGETQLTPEE
KLLRAIFGEK ASDVKDSSLR VPNGTSGTVI DVQVFTRDGV EKDKRALEIE EMQLKQAKKD
LVEELEILEA GLFARVRNLL LSGGFNDKQL ENLDRTQWLE QTLVDEDKQN QLEQLAEQYE
ELRKDFEHKL EIKRSKIIQG DDLAPGVLKV VKVYLAVKRQ IQPGDKMAGR HGNKGVISKI
NPVEDMPYDE NGQPVDIVLN PLGVPSRMNI GQILETHLGL AAKGIGDQIN AMIKQKQDVE
KLRGYIQKAY DLGDGSQKVD LSTFTDEEVL RLAKNLRKGM PLATPVFDGA HEKEIKALLE
LGGLPTSGQI TLFDGRTGEK FERPVTVGYM YMLKLNHLVD DKMHARSTGS YSLVTQQPLG
GKAQFGGQRF GEMEVWALEA YGAAYTLQEM LTVKSDDVNG RTKMYKNIVG GTHQMDPGTP
ESFNVIMKEI RSLGINIDLD EE
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