Gene HS_1555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1555 
SymbolholA 
ID4241076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1751946 
End bp1752986 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content38% 
IMG OID638105135 
ProductDNA polymerase III subunit delta 
Protein accessionYP_719760 
Protein GI113461691 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0502343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGCA TCTTTTCCGA ACAGCTCCAA TTATCACTCA ATAAACGGTT GTCCACTGTG 
TATTATTTGG TTGGACAAGA TCCTTTATTG CTGACTGAGA GCCGAGATGC AATTGTACAG
ACTGCGATAT TACAAGGGTT TGATGAAAAG TTAGAAATTA CTGTAGATCA TACCACTAAC
TGGCGTTCTA TTTTGGAACA GGCTCAATCT ATGGGGTTAT TCTTTAAGCG TCAAATGCTG
ATTTTAACTT TACCTGAAAA TCCGACCGCA CTTATACAGC GGAATTTACA AGAACTGATA
ACGTTGCTTC ATACCGATAT CTTACTGATT TTACAGATGG CGAAACTTAC TAAGCCAATG
GAAAAACAAA CGTGGTTTGA ATTAGCAGGA CAAAAAGAGC CTCAAGCTGT GTTAGTGAAT
TGTCAAACGC CGACAATCGA GCAATTACCT CGTTGGATCA GTCAGCGTGC ATACAGTATG
AAGTTAGAGA TTGTGCCGGA GGCAATAAAT CTACTTTGTT ATAGTTACGA AAACAATTTA
CTTGCCTTAA AGCAGGTTCT GCAATTGCTT GATTTGCTTT ATCCGGATCA CAAATTGACT
TTTAATCGAG TTAATTCCGT CATAGAGCAA TCTTCCGTGT TTACCGTATT TCAGTGGGTC
GATTCGCTAT TAGCGGGAAA GTTAGAACGT GCAGTGCGAA TTTTACAAGG GTTAAAAGCA
GAAGATGTAC AACCGATAAT TTTGTTACGT GCTTTACAAC GAGAGCTACT CACGATTTTA
CAATTGACCC AACCACAACA GCATATCGCT AATATTGACA TTCCGCTGGT GAATTCACAA
TTAAAAGAAC GGTTTGATCG CTTAAAAGTA TGGCAAAATC GACGTCCTTT TTTTATCCAA
GCGATACAAC GTATGACTTA CCGAAAGTTG TATATGATAA TTCAGCAACT TGCTGATTTA
GAAAGAAAAA CCAAGGCGGA TTTTAGTCAT GATATTTGGA ATGAATTAGA TAATTTATCT
GCAAAAATTT GCTGTTTTTA G
 
Protein sequence
MNRIFSEQLQ LSLNKRLSTV YYLVGQDPLL LTESRDAIVQ TAILQGFDEK LEITVDHTTN 
WRSILEQAQS MGLFFKRQML ILTLPENPTA LIQRNLQELI TLLHTDILLI LQMAKLTKPM
EKQTWFELAG QKEPQAVLVN CQTPTIEQLP RWISQRAYSM KLEIVPEAIN LLCYSYENNL
LALKQVLQLL DLLYPDHKLT FNRVNSVIEQ SSVFTVFQWV DSLLAGKLER AVRILQGLKA
EDVQPIILLR ALQRELLTIL QLTQPQQHIA NIDIPLVNSQ LKERFDRLKV WQNRRPFFIQ
AIQRMTYRKL YMIIQQLADL ERKTKADFSH DIWNELDNLS AKICCF