Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1555 |
Symbol | holA |
ID | 4241076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 1751946 |
End bp | 1752986 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638105135 |
Product | DNA polymerase III subunit delta |
Protein accession | YP_719760 |
Protein GI | 113461691 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1466] DNA polymerase III, delta subunit |
TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0502343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACCGCA TCTTTTCCGA ACAGCTCCAA TTATCACTCA ATAAACGGTT GTCCACTGTG TATTATTTGG TTGGACAAGA TCCTTTATTG CTGACTGAGA GCCGAGATGC AATTGTACAG ACTGCGATAT TACAAGGGTT TGATGAAAAG TTAGAAATTA CTGTAGATCA TACCACTAAC TGGCGTTCTA TTTTGGAACA GGCTCAATCT ATGGGGTTAT TCTTTAAGCG TCAAATGCTG ATTTTAACTT TACCTGAAAA TCCGACCGCA CTTATACAGC GGAATTTACA AGAACTGATA ACGTTGCTTC ATACCGATAT CTTACTGATT TTACAGATGG CGAAACTTAC TAAGCCAATG GAAAAACAAA CGTGGTTTGA ATTAGCAGGA CAAAAAGAGC CTCAAGCTGT GTTAGTGAAT TGTCAAACGC CGACAATCGA GCAATTACCT CGTTGGATCA GTCAGCGTGC ATACAGTATG AAGTTAGAGA TTGTGCCGGA GGCAATAAAT CTACTTTGTT ATAGTTACGA AAACAATTTA CTTGCCTTAA AGCAGGTTCT GCAATTGCTT GATTTGCTTT ATCCGGATCA CAAATTGACT TTTAATCGAG TTAATTCCGT CATAGAGCAA TCTTCCGTGT TTACCGTATT TCAGTGGGTC GATTCGCTAT TAGCGGGAAA GTTAGAACGT GCAGTGCGAA TTTTACAAGG GTTAAAAGCA GAAGATGTAC AACCGATAAT TTTGTTACGT GCTTTACAAC GAGAGCTACT CACGATTTTA CAATTGACCC AACCACAACA GCATATCGCT AATATTGACA TTCCGCTGGT GAATTCACAA TTAAAAGAAC GGTTTGATCG CTTAAAAGTA TGGCAAAATC GACGTCCTTT TTTTATCCAA GCGATACAAC GTATGACTTA CCGAAAGTTG TATATGATAA TTCAGCAACT TGCTGATTTA GAAAGAAAAA CCAAGGCGGA TTTTAGTCAT GATATTTGGA ATGAATTAGA TAATTTATCT GCAAAAATTT GCTGTTTTTA G
|
Protein sequence | MNRIFSEQLQ LSLNKRLSTV YYLVGQDPLL LTESRDAIVQ TAILQGFDEK LEITVDHTTN WRSILEQAQS MGLFFKRQML ILTLPENPTA LIQRNLQELI TLLHTDILLI LQMAKLTKPM EKQTWFELAG QKEPQAVLVN CQTPTIEQLP RWISQRAYSM KLEIVPEAIN LLCYSYENNL LALKQVLQLL DLLYPDHKLT FNRVNSVIEQ SSVFTVFQWV DSLLAGKLER AVRILQGLKA EDVQPIILLR ALQRELLTIL QLTQPQQHIA NIDIPLVNSQ LKERFDRLKV WQNRRPFFIQ AIQRMTYRKL YMIIQQLADL ERKTKADFSH DIWNELDNLS AKICCF
|
| |