Gene HS_1533 details

Gene Information

• Locus tag: HS_1533
• Symbol: metN
• ID: 4241054
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 1730544
• End bp: 1731581
• Gene Length: 1038 bp
• Protein Length: 345 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 638105113
• Product: DL-methionine transporter ATP-binding subunit
• Protein accession: YP_719738
• Protein GI: 113461669
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG1135] ABC-type metal ion transport system, ATPase component
• TIGRFAM ID: [TIGR02314] D-methionine ABC transporter, ATP-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.0757943
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTAAGC TAAAAAATAT CAGTAAAGTG TTCAATGTTT CAGGCAAAAA TCTGACCGCA 
CTTGATAATG TCAGTCTTGA AGTACCTCAA GGACAAATAT GTGGAGTAAT TGGTGCATCC 
GGAGCAGGAA AGAGTACTCT TATTCGCTGC ATTAATTTAT TGGAGCGTCC AACTTCAGGC 
TCTGTCATTG TAGATAATAC AGATTTAACT CAACTTTCAG ATAACGAGTT AATTCATGCT 
CGTCGTCATA TTGGTATGAT CTTTCAGCAC TTTAATTTAT TAAGCTCACG CACAGTCTTT 
GATAACGTTG CACTGCCGCT AGAACTAGAG AAAACGGATA AAACCCAAAT TAAACAAAAA 
GTTGACGCTC TTTTAAATTT AGTAGGACTA TATGATAAAA AAGATGTCTA TCCGGCAAAT 
TTATCCGGCG GACAAAAACA GCGTGTTGCT ATTGCTCGTG CACTTGCAAA CAGTCCTAAG 
GTATTGCTGT GCGATGAAGC AACCAGTGCA TTAGATCCGG CTACAACACA ATCTATTTTA 
AAATTATTAA AAGAAATTAA CCGCACTTTA GGTATCACTA TTTTACTGAT TACACACGAA 
ATGGATGTGG TGAAACGTAT TTGCGATCAA GTTGCGGTAA TTAATAAAGG GCAATTAATT 
GAACAAGGTT CTGTCGGAGA TATTTTCTCT AATCCGAAAA CCCTTCTTGC TCAAGAGTTT 
ATTCATTCAA CTTTCCATAT TAATCTACCG GAAGAATATA TGGAAAATTT ATCGGCAACG 
CCAAAACATG CAAAATCTTA CCCAATTATC AAATTTGAAT TTACCGGTCG CTCCGTTGAT 
GCACCGTTAT TATCTCAAGC ATCTAAACAA TTTGGCGTCG ATCTCAGTAT TTTAAGTTCA 
CAAATAGATT ACGCCGGTGA GGTAAAATTC GGCTTTGTTA TTGCCGAAGT TGAAGGTGAG 
GAAGAAGCCA TCACGCAAAC TAAAATTTAT TTAATGGAAA ATAACGTCCG TGTGGAGGTA 
TTAGGCTATG TTGGATAA 

 

Protein sequence

MIKLKNISKV FNVSGKNLTA LDNVSLEVPQ GQICGVIGAS GAGKSTLIRC INLLERPTSG 
SVIVDNTDLT QLSDNELIHA RRHIGMIFQH FNLLSSRTVF DNVALPLELE KTDKTQIKQK 
VDALLNLVGL YDKKDVYPAN LSGGQKQRVA IARALANSPK VLLCDEATSA LDPATTQSIL 
KLLKEINRTL GITILLITHE MDVVKRICDQ VAVINKGQLI EQGSVGDIFS NPKTLLAQEF 
IHSTFHINLP EEYMENLSAT PKHAKSYPII KFEFTGRSVD APLLSQASKQ FGVDLSILSS 
QIDYAGEVKF GFVIAEVEGE EEAITQTKIY LMENNVRVEV LGYVG