| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1515 |
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| Symbol | rluA |
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| ID | 4241035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 1709791 |
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| End bp | 1710456 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638105096 |
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| Product | ribosomal large subunit pseudouridine synthase A |
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| Protein accession | YP_719725 |
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| Protein GI | 113461656 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00972645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCATTAA TTGATTATCG TCCCCCTTTA GAACCTTATT TGGACATCGT ATATCGTGAT
GATCATATTC TCGTGGTGAA TAAACCGAGC GGCTTGCTTT CTGTATCCGG TAATCAACCG
CAATATTATG ATAGTGCAAT GTCGAGGGTG AAAGAAAAAT ATGGGTTTTG TGAGCCAGCA
CATCGTCTAG ATATGGCAAC AAGCGGCATT TTGCTTTTTG CAATGAGTAA AATGGCAGAT
CGAGAGCTAA AACGCCAATT TCGTGAGCGT GAACCTAAAA AACATTATCA AGCACTGATT
TGGGGACATT TAGCACAAGA TACCGGCTCA GTGAATTTGC CGTTGATTTG TGATTGGGAG
AATCGCCCAA GACAAAAAGT GTGTTTTGTT CATGGCAAAA GAGCGGTAAC AAATTTTAAA
GTTTTGCATC GGTTTGAAAA TAATATCACT CAAGTCAGAT TAACGCCTAT TACCGGAAGA
TCCCATCAAC TGCGTTTACA TATGCTTGCA TTAGGACACC CAATTTTAGG GGATAAATTC
TATGCACATC CACAGGCAAA ATCGCTTGCA CCACGTTTGT GTTTGCATGC GGAATTTTTA
CAAATAACTC ACCCGCTTAC AAAGAAAGTG ATTCAGTTTA GCACACCGGC GGATTTTCCG
ATGTAA
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| Protein sequence | MALIDYRPPL EPYLDIVYRD DHILVVNKPS GLLSVSGNQP QYYDSAMSRV KEKYGFCEPA
HRLDMATSGI LLFAMSKMAD RELKRQFRER EPKKHYQALI WGHLAQDTGS VNLPLICDWE
NRPRQKVCFV HGKRAVTNFK VLHRFENNIT QVRLTPITGR SHQLRLHMLA LGHPILGDKF
YAHPQAKSLA PRLCLHAEFL QITHPLTKKV IQFSTPADFP M
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