Gene HS_1512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1512 
Symbol 
ID4241032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1706889 
End bp1707977 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content41% 
IMG OID638105093 
Producthypothetical protein 
Protein accessionYP_719722 
Protein GI113461653 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[W] Extracellular structures 
COG ID[COG5295] Autotransporter adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG TACAATTTTT TAAATATTCA TCATTGGCAT TAGCATTGGG TTTAGGGGTA 
AGTGCTTCTG CTTTGGCAGA CCCATCAAGC GTAAGTACGA GTGACGGACC AGTTGCGCCT
CCTGGAACTT CTCAAGCTCC TGAAATACGT CCAGCGTATG CTTATAATGA TGTGAATGGT
GACCTTTATA TTTCATCACC AGATAAACAA AGAAGCACTT GGAAAAGAAA AGGGAATAAT
GACAAAGAAT ATACTTGGGA TGATGTCAAG AAGCTCATAG TCGTTGATCA TAACGTTACG
AAAACAGATT ATTTAGCTGA TGCAAACAAA ATTACACAGA GCATGCAGGC AACAGGAGCC
CTTCTTGAGG CGGTTGACGA CATTAATAGA TTTATTTCTA AAGAACACAC AGATGTAAAG
CTCACATTTA AAGATGTCAA GGATGACGTT AATTTGGCAT TTGAAGAGAT TGATAAAAAT
GCCAAAAATA TTGAAGGACT TACTTCAGGT TTGAGCGATT TACAAGCTAA AGTCGATGCA
AATAAACAAG AAACTGAAGA CGATATTGCG GACAATGCCA AGGCTATTCA TAGCAACGCA
AACGCTATTG CAACCTTGGA CAACAGAACC AATCAAATGT TGGAAAATGA CCAAAACTTG
ATGACCGGTT TAGAATCTTT AGCAACAGAA ACAAGCAAAG GCTTTGAAAG ATTTGAAAGA
GTTGCTGTCA AAACACAACA ATTAGATCAA GCCGTCGCAA ATGTCGTCGG TCGAGTAGAC
ATAACTGAGC AAGCTATTCG CCAAAACACT GCAGGCTTAG TCAATGTGAA TAAACGTGTC
GATACACTCG ACAAAAACAC CAAAGCCGGT ATCGCTTCTG CGGTCGCTTT AGGTATGTTG
CCACAATCCA CTGCTCCGGG TAAATCATTA GTGAGCTTAG GTGTCGGTCA TCAGCGTGGG
CAAAGTGCGA CTGCTATTGG AGTATCTTCT ATGAGCAGTA ACGGTAAATG GGTTGTTAAA
GGCGGTATGA GCTATGATAC ACAGCGTCAT GCTACTTTCG GCGGTTCTGT CGGCTTTTTC
TTTAACTAA
 
Protein sequence
MKKVQFFKYS SLALALGLGV SASALADPSS VSTSDGPVAP PGTSQAPEIR PAYAYNDVNG 
DLYISSPDKQ RSTWKRKGNN DKEYTWDDVK KLIVVDHNVT KTDYLADANK ITQSMQATGA
LLEAVDDINR FISKEHTDVK LTFKDVKDDV NLAFEEIDKN AKNIEGLTSG LSDLQAKVDA
NKQETEDDIA DNAKAIHSNA NAIATLDNRT NQMLENDQNL MTGLESLATE TSKGFERFER
VAVKTQQLDQ AVANVVGRVD ITEQAIRQNT AGLVNVNKRV DTLDKNTKAG IASAVALGML
PQSTAPGKSL VSLGVGHQRG QSATAIGVSS MSSNGKWVVK GGMSYDTQRH ATFGGSVGFF
FN