Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1504 |
Symbol | napC |
ID | 4241024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 1698081 |
End bp | 1698692 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638105085 |
Product | periplasmic nitrate reductase subunit NapC |
Protein accession | YP_719714 |
Protein GI | 113461645 |
COG category | [C] Energy production and conversion |
COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
TIGRFAM ID | [TIGR02161] periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAAATG AAAAATCAAA TATCATCGTT CGTTTAAGTA AAAGCGGTTG GAAATGGTTT AAGAAGCCAA GTCGTGCTAT CAGTGTATTG ATTTTATTAT CATTTATTGC AGGTATTATT TTTTGGGGCG GATTTAACAC CGCACTTGAA TACACGAATA CGGAAGAATT TTGTTCCAGT TGTCATATGA ATGATGTTGT ACCTGAATAT CGTCATTCTG TTCACTATAT GAATCGCAGT GGAGTAAAAG CCGACTGTGC CGACTGCCAT TTACCGCACG AATTTATTCC GAAATGGACA CGTAAAATCG GGGCGGCAAA AGAAGTTTAT GCGTATATTA CAGGCAAGGT AGATACCAAA GAGAAATTTG AGGCACATCG CTTAGAAATG GCACAACGTG AATGGGCTAG AATGAAAGCC AATGACTCAC AAGAATGTCG TCATTGCCAT AATTTCAATG ATATGGATAC TACTCAGCAA AAAAATGTCG CACAAAAAAT GCACAGAATG GCACAAGAAC AAGGAAAAAC CTGTATTGAT TGTCATAAAG GTATTGCTCA CCAATTACCG AATATGAAAG ACGTGCAATC CGGTTTTTTA CCTGAGCAAT AG
|
Protein sequence | MANEKSNIIV RLSKSGWKWF KKPSRAISVL ILLSFIAGII FWGGFNTALE YTNTEEFCSS CHMNDVVPEY RHSVHYMNRS GVKADCADCH LPHEFIPKWT RKIGAAKEVY AYITGKVDTK EKFEAHRLEM AQREWARMKA NDSQECRHCH NFNDMDTTQQ KNVAQKMHRM AQEQGKTCID CHKGIAHQLP NMKDVQSGFL PEQ
|
| |