Gene HS_1501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1501 
SymbollppB 
ID4241021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand+ 
Start bp1692259 
End bp1692834 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content36% 
IMG OID638105082 
Productlipoprotein B 
Protein accessionYP_719711 
Protein GI113461642 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0681914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTT TCGGTACGCT ATATGATAAA ACTATGCAAT GGGCAAATCA CCGTTTTGCT 
ACATTTTGGC TAACTTTTGT TAGTTTTATT GAGGCTATTT TCTTCCCGAT ACCACCTGAT 
GTCATGCTTA TTCCGATGTC AATAAATAAA CCTAAATGTG CTACTAAATT TGCATTTTAT 
GCAGCAATGG CTTCAGCCAT TGGTGGGGCA ATTGGTTATG GATTAGGTTA TTACGCTTTT 
GATTTCATAC AAAGTTATAT TCAACAATGG GGTTATCAAC AACATTGGGA AACTGCTCTT 
TCTTGGTTCA AAGAATGGGG TATTTGGGTA GTTTTCGTTG CAGGTTTTTC ACCTATTCCT 
TATAAAATTT TTACGATTTG TGCAGGCGTC ATGCAAATGG CATTTTTGCC TTTCTTACTT 
ACTGCCTTTA TTTCTCGTAT TGCAAGATTT TTGCTCGTTA CCCATTTAGC GGCTTGGAGC 
GGAAAAAAAT TTGCTGCGAA ATTACGTCAA TCTATTGAAT TTATCGGTTG GTCAGTTGTC 
ATTATTGCTA TAGTTGTATA TCTTGTCTTG AAATAA
 
Protein sequence
MKIFGTLYDK TMQWANHRFA TFWLTFVSFI EAIFFPIPPD VMLIPMSINK PKCATKFAFY 
AAMASAIGGA IGYGLGYYAF DFIQSYIQQW GYQQHWETAL SWFKEWGIWV VFVAGFSPIP 
YKIFTICAGV MQMAFLPFLL TAFISRIARF LLVTHLAAWS GKKFAAKLRQ SIEFIGWSVV 
IIAIVVYLVL K