| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1499 |
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| Symbol | truD |
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| ID | 4241019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 1690458 |
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| End bp | 1691465 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638105080 |
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| Product | tRNA pseudouridine synthase D |
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| Protein accession | YP_719709 |
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| Protein GI | 113461640 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.128377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAAC TCACTTATTT ACAAACAATG CCAAAACAGA CCGCACTTTT AAAAACACAC
TGTGCTGATT TTGTTGTGAA AGAACAACTG GGCTATGAAA TGTCCGGTGA TGGCGAATTT
GTTGCTGTTA AAGTGCGTAA AACAGATTGT AATACTCTAT TTGTCGCAGA AAAATTGGCA
CACTTTGCTG GTATACCTGC TAAAAATATG GGATATGCAG GACTCAAAGA TCGTAAAGCG
ATTACAGAAC AATGGTTTTG TTTACAGATG CCGGGGCAAC CCACACCTGA CTTTAATCAA
TTTCAACTTG ATGGTGTGGA AATCCTTGAG GTAACACGTC ACAATCGAAA AATTCGCACA
GGAAGCTTGG ACGGAAACCA TTTTGAAATT TTACTGCGTG AAGCACAAGA AAATGCAGAT
CTCAAAGTGC GGTTAGAAAA TATCAAGAAA AATGGGTTCC CAAATTATTT TACCGAGCAA
CGTTTCGGAC GAGATGGACA CAATTTAACT CAGGCTTTAC GCTGGGCTAA AGGTGAAATT
AACGTTAAAG ATCGCAAAAA GCGTAGTTTT TATCTCTCCG CTGCTCGTAG TGAAATTTTT
AACTTGATTG TATCCGCTCG TATTCGACAA GGTCTACACC ATAAAATCTT AGTAAATGAT
ATTTTGCAGT TATCCGGCTC ACACAGTTGG TTCCATGCTG ATCAAAAAGA AGATTTTAAT
TTATTACAAC AACGTTTAGC ACAACAGGAT ATTCAAATCA CTGCACCATT AATTGGTGAA
AACGTACAAA TTGCCAGTGA TGTAGAAAAT GAAATTATCG CTAAACATCA AGAACTCCTG
TACTTAATGC ACCAGGAAAA AATGAAATCG GCACGTCGTC CAATACTTAT GCAAGCTCAA
CACTTAAGCT GGTCATTTAT ACCTGAGGGA TTAAAACTGA CTTTTTATTT ACCGGCAGGA
AGTTATGCGA CAGCCCTCGT AAGAGAACTG GTTAATATTA ATGAATAA
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| Protein sequence | MNELTYLQTM PKQTALLKTH CADFVVKEQL GYEMSGDGEF VAVKVRKTDC NTLFVAEKLA
HFAGIPAKNM GYAGLKDRKA ITEQWFCLQM PGQPTPDFNQ FQLDGVEILE VTRHNRKIRT
GSLDGNHFEI LLREAQENAD LKVRLENIKK NGFPNYFTEQ RFGRDGHNLT QALRWAKGEI
NVKDRKKRSF YLSAARSEIF NLIVSARIRQ GLHHKILVND ILQLSGSHSW FHADQKEDFN
LLQQRLAQQD IQITAPLIGE NVQIASDVEN EIIAKHQELL YLMHQEKMKS ARRPILMQAQ
HLSWSFIPEG LKLTFYLPAG SYATALVREL VNINE
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