Gene HS_1498 details

Gene Information

• Locus tag: HS_1498
• Symbol: ispF
• ID: 4241018
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 1689970
• End bp: 1690458
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 638105079
• Product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_719708
• Protein GI: 113461639
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.00923119
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAAGAA TTGGTCATGG CTTTGATGTA CATGCCTTTG GTGGTGAAGG TCCTATTATC 
ATTGGAGGTG TCGCTATCCC TTATGAAAAA GGTTTAGTTG CACATAGTGA TGGCGACGTG 
GCATTACACG CATTAACAGA TGCTTTACTG GGTGCAATGG CTTTAGGAGA TATAGGAAAA 
TTATTCCCAG ATACTGATAT ACAATATAAA GGTGCTGATA GTCGCAGATT ATTAAGAACA 
GCCTACCAAG CAATTTTAGA CAAAGGCTAT CAAGTCGGTA ATGTTGATAT AACTATCATT 
GCACAGGCTC CCAAGATGCG TCCATATATT GACGCAATGC GTACTGTGAT TGCACAAGAC 
TTACATTGTG ATATTGAACA GGTTAATGTA AAAGCAACTA CAACAGAAAA ATTAGGCTTC 
ACTGGACGCA GTGAAGGCAT TGCTTGTGAA GCTGTTGCCC TATTAATAAA ACAAACTGGC 
ACAAAGTAA 

 

Protein sequence

MIRIGHGFDV HAFGGEGPII IGGVAIPYEK GLVAHSDGDV ALHALTDALL GAMALGDIGK 
LFPDTDIQYK GADSRRLLRT AYQAILDKGY QVGNVDITII AQAPKMRPYI DAMRTVIAQD 
LHCDIEQVNV KATTTEKLGF TGRSEGIACE AVALLIKQTG TK