Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1496 |
Symbol | ispD |
ID | 4241016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 1687463 |
End bp | 1688146 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638105077 |
Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
Protein accession | YP_719706 |
Protein GI | 113461637 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAGAG AAATTGTTGC TATAATACCT GCTGCTGGCA TTGGTTGCCG TATGCAAGCA GATCGCCCAA AACAATATTT AAAGATACTG GGCAAAACAA TTTTAGAGCA TACATTAAGT ATTTTTTTGA GTTGCGAAAA AATTAGCCAA ATTGTTTTAT CCGTCGCTGA AAATGATCCT TATTTAACTG AAATTGAGCT GTTGCGAAAT CCTCGTATCA AAATTGTTAT AGGCGGAGAA ACTCGTGCAG ACTCTGTACT AAACGGCCTA CGTCACATTA AAAATAAAAA AGCCTGGGTA CTTGTGCATG ATGCAGCACG TCCTTGTTTA CGCAATGAAG ATTTAGATAC ATTACTACAA GTTGAAGATC AAAATGGTGC TATTTTAGCC ATTCCTGCGG TAGATACTAT TAAACGATCA AATTCAGTAT TGCAAATTCA ATGTACAGAA GACCGTAATC AATTATGGTT GGCACAAACA CCGCAATTTT TCCCTGTACA CTTATTGCAA CACGCTCTAG AGCAAGCAGC AAAACGAGGT ATTATCGTCA CAGATGAAGC ATTAGCGATG GAACTTGCCG GATTTAGACC GCACTTAGTA GCAGGTCATA GTGATAATAT TAAAGTAACA CATCCTGAAG ACTTAGCATT GGCAGAATTT TTTTTAACTA GAAAACAAAG GTAA
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Protein sequence | MDREIVAIIP AAGIGCRMQA DRPKQYLKIL GKTILEHTLS IFLSCEKISQ IVLSVAENDP YLTEIELLRN PRIKIVIGGE TRADSVLNGL RHIKNKKAWV LVHDAARPCL RNEDLDTLLQ VEDQNGAILA IPAVDTIKRS NSVLQIQCTE DRNQLWLAQT PQFFPVHLLQ HALEQAAKRG IIVTDEALAM ELAGFRPHLV AGHSDNIKVT HPEDLALAEF FLTRKQR
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