Gene HS_1489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1489 
Symbol 
ID4241009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1680460 
End bp1681272 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content35% 
IMG OID638105070 
ProductCof-like hydrolase 
Protein accessionYP_719699 
Protein GI113461630 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTAA CTGACTATCG TGAAAAAATT AGCATGGTAT TTTTTGATAT TGACGAAACC 
TTATTTTCAA AAGAAAAAGA TCATTTACCG GCAAGCACTT ATTTTGCATT AAAATCTTTG
CGTGAAAAAG GTGTTTTGGT AGGTATTGCG ACAGGGCGTG CACGCTGTAC TTTTCCTGCC
AAAATCAATC AAATGATTGA TGAATTAGGG ATTGATATTT TTGTTACTGC CAATGGACAA
CATGTTGAGT ATCAGGGGCG GATATTAGCC CGTTATGCAA TTGACAAAAA TAAATTGTAC
AAACTGGTTG AGTTTTTTGA TCAACATGGC ATTGATTATG TTCAAGTAGC GAACACCGAG
ATTAAAATTT CCAGCCTCAA TCCAATACTC ACTGATGCTT TTAATCCAAT TAGTACGAAT
TATCAAGTAG ATCCTCGTTA TTTTGAACGG CATGATGTAT TACAAATTTT GTCATTCTAT
GAGGATAAAA GCTACGATGA ATTAATTGCT CAATCTAATA TTTTAGAAGG ATTAAAGACA
GTGCGTTGGC ATCCTAATTC AGTGGATATA TTTGATAAAG ACGGTTCAAA AGCACGGGGA
ATCCAAGTTG TTGTTGAGCA TTTAGGGTTG AATATGGAAA ATGTGATGGC ATTTGGTGAT
GGGCTTAATG ACATAGAAAT GCTAAGTGCG GTCGGTGTTG GCGTTGCTAT GGGAAATGGT
CATGAATGGT TAAAACAACA AGCGAATTAT GTTACTGATC ATATTGAAGA AAATGGCATT
TATAATTTTT TACATAAAGT TGGTTTGGTG TAA
 
Protein sequence
MSLTDYREKI SMVFFDIDET LFSKEKDHLP ASTYFALKSL REKGVLVGIA TGRARCTFPA 
KINQMIDELG IDIFVTANGQ HVEYQGRILA RYAIDKNKLY KLVEFFDQHG IDYVQVANTE
IKISSLNPIL TDAFNPISTN YQVDPRYFER HDVLQILSFY EDKSYDELIA QSNILEGLKT
VRWHPNSVDI FDKDGSKARG IQVVVEHLGL NMENVMAFGD GLNDIEMLSA VGVGVAMGNG
HEWLKQQANY VTDHIEENGI YNFLHKVGLV