Gene HS_1487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1487 
Symboltmk 
ID4241007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand- 
Start bp1678646 
End bp1679278 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content40% 
IMG OID638105068 
Productthymidylate kinase 
Protein accessionYP_719697 
Protein GI113461628 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.396843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAG GAAAGTTTAT TGTTATTGAA GGCTTAGAAG GTGCAGGTAA AAGCAGTACT 
CATCAAGTTG TGGTAAATAC CTTGAAAGAG TTTGGTATCC ACGAAGTTGT TTTTACTCGA 
GAGCCGGGTG GTACGCCTTT AGCAGAAAAA TTACGTTATC TTATTAAACA CGAGGTAGAG 
GAACTTGTCA CGGCTAAAGC AGAATTGCTC ATGTTGTATG CAGCACGAGT TCAGCTTGTA 
GAGAACGTGA TAAAACCGGC TTTGGCACAA GGTAAATGGG TGGTGGGAGA TCGCCATGAT 
TTATCTTCTC AAGCTTATCA GGGTGGCGGT CGAGGTTTGG ATCAGCATTT GATGACAACG 
TTAAAAAATG CTGTATTGGG CGATTTTAAG CCCGATTTTA CGTTGTATCT TGATATTGAA 
CCAGAAATTG GTTTAGCGAG GGTAAGAGGG CGAGGGGAGT TAGATCGTAT TGAACAACAA 
AATTTAGATT TTTTTCACCG CACTCGAGCA AGGTATTTAC AGTTAGTGCA ACAAGATCCT 
AATGCCGTAT TAATTAATGC AGATCAGCCT ATTGAGCTTG TGCAGCAAGA TATTCGTAAA 
GCTGTGCAAA AATTTATTGA AGAAAATGTG TAA
 
Protein sequence
MKTGKFIVIE GLEGAGKSST HQVVVNTLKE FGIHEVVFTR EPGGTPLAEK LRYLIKHEVE 
ELVTAKAELL MLYAARVQLV ENVIKPALAQ GKWVVGDRHD LSSQAYQGGG RGLDQHLMTT 
LKNAVLGDFK PDFTLYLDIE PEIGLARVRG RGELDRIEQQ NLDFFHRTRA RYLQLVQQDP 
NAVLINADQP IELVQQDIRK AVQKFIEENV