Gene HS_1483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1483 
Symbol 
ID4241003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1674968 
End bp1676257 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content36% 
IMG OID638105064 
Producthypothetical protein 
Protein accessionYP_719693 
Protein GI113461624 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.234798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTAT TACAGGCAAT ATTAGTCATT ATTGGCTTAA TTATTATTAG TGCGGTCGTT 
TCTTCCGCTG AAATTTCGTT AGCCGGTTCA CGTAAATTGA AATTGCAAAT GTTAGCGAAT
GAGGGTGATA AACGAGCTGT GCAAGTATTA AAATTACAAG AGCAACCGGG ACGTTTTATC
ACAGTTGTCC AAATTGGACT AAACATGGTG GCAATTTTTG GAGGGATTGT GGGTGAAAGT
GCCATTCGCC CTTTTTTACA GGAGATTTTA AGTGCTTATA CGCAATCTTT TTGGGTAGAA
AGTGCGGCTT CTTGGCTGGC TTTTATTATT GTCACTGTTT CTTTTGTTCT TTTTGCTGAT
TTAATGCCCA AACGTTTAGC GATGACAAGT CCGGAAAAAG TAGCATTGTC AACAGTAGGA
ATAATGTCTT TTTGCATTGT TATTTTTAAA CCGGTGGTCT TAATTTTTGA TACTATTGCG
AACGGAATTT TTCGCTTATT GGGAATTTCT ACCATGCGGG AAGAGAGTAT GACGCCAGCG
GATATTGTCG CAATTGTAGA TGCCGGTGCT GAAGCAGGCG TATTAAAAGC ACAAGAGCAT
TATCTGATTG AAAATATTTT TGAAATGCAA GAGCGTACAG TTACGTCAAC TATGACGACT
CGTGAAAATA TTGTGTTTTT AGACCGCTCT TTTGAGCGTG AGCAAGTCAT CACCACAATT
AAAAATAATC CACATTCAAA ACTACTTATT TGTGATCACG GTTTAGATAA AATTTTGGGT
TATGTGGAAA GTCATAATTT ATTAACTTTA TATTTGCAAG AACAACAAGT TTCTTTAACC
GAGCCTAGAA TTTTACGAAA GGCATTATTT ATTCCTGATA CGCTTTCCTT ATATGAAGTA
TTGGAGTTGT TCAAGTCTTC CGGTGAAGAT TTTGCGGTTA TTGTAAATGA ATATGCTCTC
GTAGTGGGAA TTGTGACTTT AAATGATGTA ATGAGTATTG TAATGGGCGA GTTAGTTTCT
AATGAGGAAG AACAAATTGT TCGCCGTGAT GAAACATCTT GGTTGATTGA TGGTGCAACT
CCCTTAGAAG ATGTAGCACG GGCATTGGAA ATTAATGAGT TTCCGGATGA AGAAAATTAC
GAAACCATAG GGGGATTTAT GATGTATATG CTACGTAAAA TTCCGAAAAA GACAGATTTC
GTATTATATG ATAGATATAA ATTTGAGATT ATTGATACCG AGAATTTTAA GATTGATCAG
TTGATGGTAT CCTTAAGAAA GGATATTTAG
 
Protein sequence
MSLLQAILVI IGLIIISAVV SSAEISLAGS RKLKLQMLAN EGDKRAVQVL KLQEQPGRFI 
TVVQIGLNMV AIFGGIVGES AIRPFLQEIL SAYTQSFWVE SAASWLAFII VTVSFVLFAD
LMPKRLAMTS PEKVALSTVG IMSFCIVIFK PVVLIFDTIA NGIFRLLGIS TMREESMTPA
DIVAIVDAGA EAGVLKAQEH YLIENIFEMQ ERTVTSTMTT RENIVFLDRS FEREQVITTI
KNNPHSKLLI CDHGLDKILG YVESHNLLTL YLQEQQVSLT EPRILRKALF IPDTLSLYEV
LELFKSSGED FAVIVNEYAL VVGIVTLNDV MSIVMGELVS NEEEQIVRRD ETSWLIDGAT
PLEDVARALE INEFPDEENY ETIGGFMMYM LRKIPKKTDF VLYDRYKFEI IDTENFKIDQ
LMVSLRKDI