Gene HS_1476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1476 
SymbolprfB 
ID4240996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1668554 
End bp1669336 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content42% 
IMG OID638105057 
Productpeptide chain release factor 2 
Protein accessionYP_719686 
Protein GI113461617 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0780074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAAAAA AACTTGCCGC CCTTGAGTTC CGTCGTATGT TCAGCGGACA ACATGATAAC 
TGTGATTGTT ATGTTGACCT ACAAGCAGGC TCCGGCGGAA CAGAAGCTCA GGATTGGACA
GAAATGCTAT TGCGTATGTA TTTACGTTGG GCAGAAAGCA AGGGCTTTAA AACCGAATTA
GTTGAAGTTT CCAGTGGCGA TGTTGCAGGT TTGAAATCTG CCACTATTCG TATTGCAGGC
GAATATGCTT TCGGTTGGTT AAGAACAGAA ACAGGTATTC ATCGATTAGT ACGTAAAAGT
CCATTTGATT CCAATAATCG TCGCCATACT TCTTTCGCCG CTGCCTTCGT TTATCCTGAA
ATTGATGATG ATATTGAAAT AGAAATCAAC CCTGCGGATT TACGTATTGA TGTTTATCGT
GCATCAGGTG CCGGCGGACA ACACGTTAAT AAAACAGAAA GTGCGGTGCG TATTACTCAT
ATTCCTAGCG GTATTGTGGT GCAATGCCAA AATGGACGAT CTCAACATCA GAATAAAGAT
CAAGCCATGA AGCAGCTAAA AGCAAAACTG TACGAAATGG AAATAATGAA AAAAAATGCT
GATAAACAAG CCATGGAAGA CAGTAAATCT GATATCGGCT GGGGTAGTCA AATCCGCTCC
TATGTGCTGG ATGATTCCCG TATTAAAGAT TTACGAACAG GTGTTGAAAA TCGCAATACT
CAAGCTGTAT TGGACGGCGA TTTGGATCGT TTTATTGAAG CCAGCTTAAA AGCCGGACTA
TAA
 
Protein sequence
MEKKLAALEF RRMFSGQHDN CDCYVDLQAG SGGTEAQDWT EMLLRMYLRW AESKGFKTEL 
VEVSSGDVAG LKSATIRIAG EYAFGWLRTE TGIHRLVRKS PFDSNNRRHT SFAAAFVYPE
IDDDIEIEIN PADLRIDVYR ASGAGGQHVN KTESAVRITH IPSGIVVQCQ NGRSQHQNKD
QAMKQLKAKL YEMEIMKKNA DKQAMEDSKS DIGWGSQIRS YVLDDSRIKD LRTGVENRNT
QAVLDGDLDR FIEASLKAGL