| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1469 |
|---|
| Symbol | |
|---|
| ID | 4240989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | - |
|---|
| Start bp | 1660679 |
|---|
| End bp | 1662475 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638105050 |
|---|
| Product | ABC transporter, ATP-binding/permease protein |
|---|
| Protein accession | YP_719679 |
|---|
| Protein GI | 113461610 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTGGT CAGAAGAACT TTTCGCATCA TTAATTTGGA TAGTGAAAAG CTTGGTTATT
GCGAGCTTGG TGTTTTCTTT AATTTTATAT TTTTTAACAA AAATGACTCG CTGGGGACAC
CAATTTTGGC TATTAGCGAA AAGTTATTTA TCCCCACGTC GTAGCCTTAT GCCTTTATGT
TATTTTTGGA TAATTGTTTT TTTTGATTTA TTAGCCGTGC GGTTAGATAT TTTATTTTCT
GGTTGGTATA AGTCCATGTA TGATGCCTTA CAAGAAATGA ATGTAGCCAG ATTTTGGCAG
CAAATGATTG TTTTCTCTCT TTTAGCTGCG GTTCATATAT GTAATTTTTT ATTCACTTAC
TATATTTCTC AGGATTTCAA AATTAAGTGG AGAACTTGGC TTAATAATGA AATGTTAGAT
AAATGGTCTG AAAATCAGGC TTATTATAAA ACCCAGTGCC TTGCTCATCA ATTGGATAAT
CCGGATCAAC GTATTCAACA AGATGTTGAT GCCTATGTTT CTAATTCATT AAACTTTGCT
ACAGGTGTTA TTTCTTCTAC AGTGTCTTTA GCTGCATTTA CCGTGATTCT CTGGAATTTG
TCAGGCCCAA TGGTAATTAT GGGCTACGAA ATTCCACATA TGATGGTATT CTTAGTGTTT
ATTTATGTAT TGGTGAGCAG TGTAATTGCT TTTAGAATCG GGCGTCCATT GATTCAATTG
AATTTTGCTC ATGAGCGTTT AAATGCAAAC TATCGTTATT CACTCATTCG TTTGAAAGAA
TACGCAGAAA GCATAGCGTT TTATCGAGGA GAGAATATAG AAAAATCGAT ACTATTACGT
CAATTTGAAA AAGTCATTGG TAATTTGTGG CAAATAATTC ACCGCACTTT GAAATTATTT
GGCTTTAACT TAGTGGTTTC ACAGGTATCA GTCATTTTTC CATTTATTAT TCAGGCAACC
CGTTATTTTT CCGGACAGAT TAAATTGGGG GATTTAGTAC AAACCTCACA GGCTTTTAGC
AAGGTTCAGT CAGCATTATC GTTTTATCGA AACTCCTATG ATGATTTTGC CGCCTATCGA
GCGGTTCTGG ATCGTCTAAC AGGTTTCCAT AGTGCTATTG AAGTAGCTAA TCAGCCATCA
AAAACACAAA TTAAACCTCA TATGTCAGCG GTTATTTTTG AGAATTTAAA TATTAATACA
CCGGAAGGAA ATACTCTCAT TGAGAAGCTG AACTTAACAA TTGAGCAAGG AGTTTCTTTA
TTGATTAAAG GTAAATCGGG TGTAGGGAAA ACAACTTTAT TGCGTACAGC AGCAGGTTTA
TGGCCGTATT CAGAAGGGCA GATTTTTTGT CCACAACAAA CATTGTTTCT AGCACAAAAA
ACCTATTTAC CACAGGGGTG CTTAATTGAT GCTCTTTATT ATCCTGAACC AGTTCCAGCC
GACATTGACG CAGACAATAT CAGTAACATT TTGCAAAAAG TGCATTTGTC TCATATGGTT
GACAAATTGG ATGTAGAAAA TGATTGGACG AGAGTACTAT CTTTAGGGGA ACAGCAACGT
GTAGCTTGTG CCAGAGTATT GTTGCATAAG CCTAAAGTTG TTTTCTTAGA TGAGGCTACA
TCAAGCATGG ATGAAGGGCT TGAAGATGCG ATGTATCGTT TATTATTAAC TGAATTACCT
AGTACAACTT TAATCAGCGT GGGACATCGT TCAACTTTGC ATAAGTATCA TCAATTACAC
TTGCAGATCA ATAGTGATAA AAGTTGGGAA ATCACGAAGA ATGTGGCAGT ATTTTAG
|
|---|
| Protein sequence | MNWSEELFAS LIWIVKSLVI ASLVFSLILY FLTKMTRWGH QFWLLAKSYL SPRRSLMPLC
YFWIIVFFDL LAVRLDILFS GWYKSMYDAL QEMNVARFWQ QMIVFSLLAA VHICNFLFTY
YISQDFKIKW RTWLNNEMLD KWSENQAYYK TQCLAHQLDN PDQRIQQDVD AYVSNSLNFA
TGVISSTVSL AAFTVILWNL SGPMVIMGYE IPHMMVFLVF IYVLVSSVIA FRIGRPLIQL
NFAHERLNAN YRYSLIRLKE YAESIAFYRG ENIEKSILLR QFEKVIGNLW QIIHRTLKLF
GFNLVVSQVS VIFPFIIQAT RYFSGQIKLG DLVQTSQAFS KVQSALSFYR NSYDDFAAYR
AVLDRLTGFH SAIEVANQPS KTQIKPHMSA VIFENLNINT PEGNTLIEKL NLTIEQGVSL
LIKGKSGVGK TTLLRTAAGL WPYSEGQIFC PQQTLFLAQK TYLPQGCLID ALYYPEPVPA
DIDADNISNI LQKVHLSHMV DKLDVENDWT RVLSLGEQQR VACARVLLHK PKVVFLDEAT
SSMDEGLEDA MYRLLLTELP STTLISVGHR STLHKYHQLH LQINSDKSWE ITKNVAVF
|
|---|
| |