Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1447 |
Symbol | fucP |
ID | 4240963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 1633660 |
End bp | 1634952 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638105025 |
Product | L-fucose permease |
Protein accession | YP_719659 |
Protein GI | 113461590 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | [TIGR00885] L-fucose:H+ symporter permease |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0300963 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGCTA AAACTCTTGA AAAGCAATTT ATTGCACCTT TTATATTAAT TACCAGTTTG TTTGCTTTGT GGGGATTTGC AAATGATATT ACGAATCCAA TGGTAGCCGT TTTCCAAACT GTTATGGAAA TTCCAGCATC AGAAGCTGCT CTTGTTCAAT TTGCCTTTTA TGGAGGCTAT GGAACAATGG CAATTCCAGC CGCACTTTTT GTCAGCCGAT TTAATTATAA ATCCGGTGTC TTATTAGGTT TAGCCCTTTA TGCAGTTGGT GCATTCTTAT TCTATCCGGC AGCTTTGTAT GAAGAATTTA CTTTTTTCTT ACTATCACTT TATATTCTGA CTTTTGGGTT AGCTTTTTTA GAAACTACAG CCAACCCATA TATTCTTTCG ATGGGAGATC CGCAAACCGC AACCCGCCGT TTAAATTTAG CACAATCTTT TAACCCGTTG GGTTCGATTA CAGGTATGTT TGTGGCATCA CAAGTAGTAT TAACCAGCCT AGAATCTGAA AAACGTGATG CAATGGGAAA TCTAATTTTT AATACCTTAT CTACCGCAGA AAAAGCGACT ATACGCACCC ATGATTTAGA AATTATTCGT AATCCTTATT TAGCTGTTGG AGGTGTTGTT TTAATCATCA TGTTAGTCAT TAGTTTATAC AAAATGCCTA CTACAAAAAT GGAAGAGCTA GGGGGGGGAA GAATTGCATT CAAAGACGCA TTTTCTCGCC TAATCCAAAA TGCAAAGTAT CGTGAAGGTG TAATTGCTCA GGTTTTCTAT GTGGGTGTTC AAATTATGTG CTGGACCTTT ATTATCCAAT ATGCCGAACG CTTAGGTTTT ACTAAATCTG AAGCACAAAA TTTTAATATT ATTGCAATGA TAATTTTTGT TGCCAGTCGC TTTATCAGCA CCAGTATTAT GAAATACTTA AAAGCTGAGT TGATGTTATG CCTATTTGGT ATCGGCGGTT TCTTAAGCAT TGTAGGCGTA ATTTTTATCG ATGGAGAATT AGGATTATAT TGCTTAATTT TAACCTCAGG TTTTATGTCT CTTATGTTCC CAACAATCTA CGGTATTGCC TTATACGGTT TAAAAGAAGA GGCAAGTCTT GGTGCCGCAG GTCTAGTTAT GGCAATCGTA GGCGGTGCAT TAATGCCACC TTTACAAGGC ATGATCATTG ATAAAGGTGA AATTTTTAAT TTGCCTGCTG TGAACATTTC TTTTGTTCTG CCATTAATCT GCTTTATTCC AATTACTATT TATGGCTATA GAAGTTGGAA GGTATTGAAA TAA
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Protein sequence | MTAKTLEKQF IAPFILITSL FALWGFANDI TNPMVAVFQT VMEIPASEAA LVQFAFYGGY GTMAIPAALF VSRFNYKSGV LLGLALYAVG AFLFYPAALY EEFTFFLLSL YILTFGLAFL ETTANPYILS MGDPQTATRR LNLAQSFNPL GSITGMFVAS QVVLTSLESE KRDAMGNLIF NTLSTAEKAT IRTHDLEIIR NPYLAVGGVV LIIMLVISLY KMPTTKMEEL GGGRIAFKDA FSRLIQNAKY REGVIAQVFY VGVQIMCWTF IIQYAERLGF TKSEAQNFNI IAMIIFVASR FISTSIMKYL KAELMLCLFG IGGFLSIVGV IFIDGELGLY CLILTSGFMS LMFPTIYGIA LYGLKEEASL GAAGLVMAIV GGALMPPLQG MIIDKGEIFN LPAVNISFVL PLICFIPITI YGYRSWKVLK
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