Gene HS_1447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1447 
SymbolfucP 
ID4240963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1633660 
End bp1634952 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content36% 
IMG OID638105025 
ProductL-fucose permease 
Protein accessionYP_719659 
Protein GI113461590 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID[TIGR00885] L-fucose:H+ symporter permease 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0300963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCTA AAACTCTTGA AAAGCAATTT ATTGCACCTT TTATATTAAT TACCAGTTTG 
TTTGCTTTGT GGGGATTTGC AAATGATATT ACGAATCCAA TGGTAGCCGT TTTCCAAACT
GTTATGGAAA TTCCAGCATC AGAAGCTGCT CTTGTTCAAT TTGCCTTTTA TGGAGGCTAT
GGAACAATGG CAATTCCAGC CGCACTTTTT GTCAGCCGAT TTAATTATAA ATCCGGTGTC
TTATTAGGTT TAGCCCTTTA TGCAGTTGGT GCATTCTTAT TCTATCCGGC AGCTTTGTAT
GAAGAATTTA CTTTTTTCTT ACTATCACTT TATATTCTGA CTTTTGGGTT AGCTTTTTTA
GAAACTACAG CCAACCCATA TATTCTTTCG ATGGGAGATC CGCAAACCGC AACCCGCCGT
TTAAATTTAG CACAATCTTT TAACCCGTTG GGTTCGATTA CAGGTATGTT TGTGGCATCA
CAAGTAGTAT TAACCAGCCT AGAATCTGAA AAACGTGATG CAATGGGAAA TCTAATTTTT
AATACCTTAT CTACCGCAGA AAAAGCGACT ATACGCACCC ATGATTTAGA AATTATTCGT
AATCCTTATT TAGCTGTTGG AGGTGTTGTT TTAATCATCA TGTTAGTCAT TAGTTTATAC
AAAATGCCTA CTACAAAAAT GGAAGAGCTA GGGGGGGGAA GAATTGCATT CAAAGACGCA
TTTTCTCGCC TAATCCAAAA TGCAAAGTAT CGTGAAGGTG TAATTGCTCA GGTTTTCTAT
GTGGGTGTTC AAATTATGTG CTGGACCTTT ATTATCCAAT ATGCCGAACG CTTAGGTTTT
ACTAAATCTG AAGCACAAAA TTTTAATATT ATTGCAATGA TAATTTTTGT TGCCAGTCGC
TTTATCAGCA CCAGTATTAT GAAATACTTA AAAGCTGAGT TGATGTTATG CCTATTTGGT
ATCGGCGGTT TCTTAAGCAT TGTAGGCGTA ATTTTTATCG ATGGAGAATT AGGATTATAT
TGCTTAATTT TAACCTCAGG TTTTATGTCT CTTATGTTCC CAACAATCTA CGGTATTGCC
TTATACGGTT TAAAAGAAGA GGCAAGTCTT GGTGCCGCAG GTCTAGTTAT GGCAATCGTA
GGCGGTGCAT TAATGCCACC TTTACAAGGC ATGATCATTG ATAAAGGTGA AATTTTTAAT
TTGCCTGCTG TGAACATTTC TTTTGTTCTG CCATTAATCT GCTTTATTCC AATTACTATT
TATGGCTATA GAAGTTGGAA GGTATTGAAA TAA
 
Protein sequence
MTAKTLEKQF IAPFILITSL FALWGFANDI TNPMVAVFQT VMEIPASEAA LVQFAFYGGY 
GTMAIPAALF VSRFNYKSGV LLGLALYAVG AFLFYPAALY EEFTFFLLSL YILTFGLAFL
ETTANPYILS MGDPQTATRR LNLAQSFNPL GSITGMFVAS QVVLTSLESE KRDAMGNLIF
NTLSTAEKAT IRTHDLEIIR NPYLAVGGVV LIIMLVISLY KMPTTKMEEL GGGRIAFKDA
FSRLIQNAKY REGVIAQVFY VGVQIMCWTF IIQYAERLGF TKSEAQNFNI IAMIIFVASR
FISTSIMKYL KAELMLCLFG IGGFLSIVGV IFIDGELGLY CLILTSGFMS LMFPTIYGIA
LYGLKEEASL GAAGLVMAIV GGALMPPLQG MIIDKGEIFN LPAVNISFVL PLICFIPITI
YGYRSWKVLK