| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1430 |
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| Symbol | pilB |
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| ID | 4240946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 1616691 |
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| End bp | 1618106 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638105008 |
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| Product | pilin/fimbriae biogenesis protein |
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| Protein accession | YP_719642 |
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| Protein GI | 113461573 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAATTC CTCAATCTGA AGATATGTCT CCGATAGTGA TGTCGCTCGA TGGAGATACT
TATGAAATAA CACCGCACTT ATGGCAAAGA AATCAGCAAC AATCCCAAAT TCTGCTACGC
TATTTTGCCA TTCCTTTACA GGAAAATGAA CAAACGTTAT GGTTAGGCGT TGATAGTCTA
AATAATATTA GTGCCTGTGA AACATTTGCA TTTTTGTATG GAAAAATTGT AGAACCGGTT
TTACTTAATA ACCAATTACT TAAACAGTTA CTACAAAACT TATCGCCACA GCAAAATAAT
ATGTTCGTTG AAGAGCAACC TATAAATCAA TATGTAGCCG AGCATCGTAT AGAAGTAACT
GAAAAGTCTG ATGAACCCGT GATTCAACTT TTAGATCATA TTTTTGAAAA TGCGTTAAAG
CAACATGTAT CAGATATTCA TATTGAACCG CAAATGAATT GCTTGCAAAT ACGTTTCAGA
ATAGACGGTA TTTTACAATG CCAATCGCCT CTTCCGCTTT CGCTGAGTAA GCGTATTCTT
TCACGTTTAA AGTTACTGGC CAAATTGGAT ATAAGCGAAA CACGGTTACC TCAAGATGGA
CGATTTCATT TTAAAACAAC ATTTTCTGAC ATCCTTGATT TTCGTTTATC AACCCTTCCG
ACGAATATGG GTGAAAAAGC CGTGTTGCGT TTACAGCAAA ATAAACCTGT ACAGTTGAGT
TTTGCGGAAC TCGGCATGAC AGAAAACCAG CAAAAATCAT TCAAACAGGC ACTATCTCAA
CCCCAAGGAC TCATTTTAGT GACCGGTCCA ACAGGGAGTG GAAAAAGTAT CTCACTTTAC
ACCGCACTTC AATGGCTGAA TGATAAGCAC AAACATATTA TGACAGCGGA AGATCCGATA
GAAATTGAAT TGAACGGTAT CATTCAATGT CAAATAAATC CGCAGATCGG GTTAGATTTT
AGCCGGCTGT TAAGAACTTT TCTTCGTCAA GATCCTGACA TTATTATGTT GGGTGAAATT
CGGGATAACG AAAGTGCAAT AATGGCATTA AGAGCAGCAC AAACCGGACA TCTTGTTCTC
TCAACTTTAC ATACAAATGA TGCTCCGTCG GCAGTCTCAC GCTTGCTTCA ATTAGGGGTA
AAGCAACATG AAATTGACAA TAGTTTATTA TTGGTCATCG CTCAACGTTT GGTACGAAAA
AAATGCCCAC ATACAGAAAA TGAAAATTGC ACTTGTCATC AGAAATATCA AGGGCGAATT
GGGGTTTATC AATTTTTACA ACCGCATCTA ATAGATAATC ATATTTGCTA CCAAACGGAT
TATGCTCATT TGCGTGAAAG TGCAATGGAA AAAGTGCGGT TAGAAATAAC AGATTTAGCA
GAAGTGGATA GAGTTATTGG ACAAAGTAAT GAATAA
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| Protein sequence | MIIPQSEDMS PIVMSLDGDT YEITPHLWQR NQQQSQILLR YFAIPLQENE QTLWLGVDSL
NNISACETFA FLYGKIVEPV LLNNQLLKQL LQNLSPQQNN MFVEEQPINQ YVAEHRIEVT
EKSDEPVIQL LDHIFENALK QHVSDIHIEP QMNCLQIRFR IDGILQCQSP LPLSLSKRIL
SRLKLLAKLD ISETRLPQDG RFHFKTTFSD ILDFRLSTLP TNMGEKAVLR LQQNKPVQLS
FAELGMTENQ QKSFKQALSQ PQGLILVTGP TGSGKSISLY TALQWLNDKH KHIMTAEDPI
EIELNGIIQC QINPQIGLDF SRLLRTFLRQ DPDIIMLGEI RDNESAIMAL RAAQTGHLVL
STLHTNDAPS AVSRLLQLGV KQHEIDNSLL LVIAQRLVRK KCPHTENENC TCHQKYQGRI
GVYQFLQPHL IDNHICYQTD YAHLRESAME KVRLEITDLA EVDRVIGQSN E
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