Gene HS_1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1406 
Symbol 
ID4240921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand+ 
Start bp1596868 
End bp1597503 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content36% 
IMG OID638104983 
Productrepressor protein 
Protein accessionYP_719618 
Protein GI113461549 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0402463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC AGTGGAATGA ATTCGTTAGA GATCGAATGT CCGAGAAAAA TCTCAAGCAA 
GAAGATATTG CTGAGGCAAT AGAAAGAACA CAGGGTGCAG TTGGGCATTG GTTAACAGGA 
CGAAGATCTC CTAACTTTAT GGAAGTAGCA AAAATGCTTA ACGCTACTGG GACTGATCAG 
GTTATTCTCA ATTCAGATGG AACGATAGAA GACATAGAGT TTATAGGAAT ACCAAAAAAA 
GGATTAGTTA AGGTCATTGG AGAAGCAACG ATGGGAACAG ACGGAAGTGT TGACATTGAA 
GAAATTCACG TTGGCTATAT AGATATTTTC ACCACTGATC CAAAAGCATT TTGTTTACGC 
GTAAAAGGCT CAAGCATGGA GCCGAGAATA CATAGTGGCG AATTTGTTCT AGTTGAACCT 
CAATCCCCTT TTAGTAACGG TGATGATGTT TTCATTCGTA CAAAAGATGG TAAAAATATG 
ATTAAGATCC TTGATTACCA GAAAGATGGT GAATATAGAT TCTCAAGTAT TAACAACGAT 
CATAAACCAT TTAATCTAGC TATAGATGAG GTTGAGCTAG TGTATTATGT TGCGGGTATT 
TTAAAAAAAT CTAGATTTGT TGATCTTGAA CCATAA
 
Protein sequence
MKKQWNEFVR DRMSEKNLKQ EDIAEAIERT QGAVGHWLTG RRSPNFMEVA KMLNATGTDQ 
VILNSDGTIE DIEFIGIPKK GLVKVIGEAT MGTDGSVDIE EIHVGYIDIF TTDPKAFCLR 
VKGSSMEPRI HSGEFVLVEP QSPFSNGDDV FIRTKDGKNM IKILDYQKDG EYRFSSINND 
HKPFNLAIDE VELVYYVAGI LKKSRFVDLE P