Gene HS_1398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1398 
Symbol 
ID4240913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand+ 
Start bp1592579 
End bp1593193 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content43% 
IMG OID638104975 
Productprophage antirepressor 
Protein accessionYP_719610 
Protein GI113461541 
COG category[K] Transcription 
COG ID[COG3617] Prophage antirepressor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.178309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACTC AAATTTCTAC TTTCAACTTC AAATCTCACC AAGTTCGCAT TCAATCATTC 
AATAACGAGC CTTATTTTTG CTTATCCGAT GTCTGCGATG TCTTAGGCTT AAATCGCCGT 
AGTGCCGAAA CATTTAACTT GAATGAGAAG GGGTGCAATA ATATTGCAAC CCTTACCAAA 
GGTGGCGAAC AAATCATTAC TTTCATCAAC GAACCAAACC TATACCGTAT CATCTTCAAA 
TCACGCAAAG CTGAAGCGGT CGAGTTTCAA AACTGGGTCT TTGAAGAAGT GCTACCGCAA 
ATCCGTAAAA CGGGGAAATA TCAGCTAAAA CCGAAACAGT TTGCCTTGCC GGAACCTGAA 
CCCACAGTCA CTTTTACTTT TACCGAAAGC GAATTACGCA ACTTCATCAA CACGTGGATG 
CAGTTCACCC GTTTTCAAGA AAGCGTCTAT TTCCTGCTCC GTGCCTTTGG GTTTGACCTT 
GACCGCTTTG AAGAACGCTC CGCACAGTTT AATTACAACC TCTGCAAGCA GAACATCAAA 
GAAACCAATC CGATTATCAA ACGAATGCTG GCAAGCCTCA AACAGGAAAA CCGCTTGCCA 
CTGAAAACAC GCTAA
 
Protein sequence
MNTQISTFNF KSHQVRIQSF NNEPYFCLSD VCDVLGLNRR SAETFNLNEK GCNNIATLTK 
GGEQIITFIN EPNLYRIIFK SRKAEAVEFQ NWVFEEVLPQ IRKTGKYQLK PKQFALPEPE 
PTVTFTFTES ELRNFINTWM QFTRFQESVY FLLRAFGFDL DRFEERSAQF NYNLCKQNIK 
ETNPIIKRML ASLKQENRLP LKTR