Gene HS_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1388 
Symbol 
ID4240903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1586124 
End bp1586660 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content42% 
IMG OID638104965 
Productlysozyme, phage-related lysozyme 
Protein accessionYP_719600 
Protein GI113461531 
COG category[R] General function prediction only 
COG ID[COG3772] Phage-related lysozyme (muraminidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000577391 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAGT TGGTTAAAGT TGGTGGCATT TGTTCGGTGT CTGCCATTAT TGCCTTGATG 
ATGTTGAATT TTGCTGACAA TTTTCGCACA AGCCAACAAG GGCTTGAGTT AATAGGACAG
GTAGAAGGCT GTCGCCGTGA CCCTTATCAT TGCCCTTCTG ATGTGCTTAC TGTAGGAATT
GGGAGTACTG TGGCAAGTAG CGGGGCAATT GAACCGCATA AGCGTTATTC AGATGCAGAA
ATTGCAAAGC GTTGGGTAAA CGATATTCAA GTAGCAGAAC GTTGTGTAAA TCAGTTCGCT
AACGGTCGGC TAATGCCTCA ATCTGTTTTT GATTCAGTGG TTTCAATTAC GTTTAATGTT
GGGTGCGGTA AGTTATCTCG CTCGACCATG TTTCGTCAAG CAAATGAAAA AGATTGGAGA
GGTGTTTGTA ATGAATTTCC AAAATGGGTT TATGCAGGCG GTAAGCGATT ACGAGGACTT
GAAATACGTA GAGAGAAAGA GAAAGCGTTA TGTTTGTCTG GGGTAAAGCA ACTTTAA
 
Protein sequence
MSKLVKVGGI CSVSAIIALM MLNFADNFRT SQQGLELIGQ VEGCRRDPYH CPSDVLTVGI 
GSTVASSGAI EPHKRYSDAE IAKRWVNDIQ VAERCVNQFA NGRLMPQSVF DSVVSITFNV
GCGKLSRSTM FRQANEKDWR GVCNEFPKWV YAGGKRLRGL EIRREKEKAL CLSGVKQL