| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1358 |
|---|
| Symbol | lpxB |
|---|
| ID | 4240873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | - |
|---|
| Start bp | 1550806 |
|---|
| End bp | 1551975 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638104935 |
|---|
| Product | lipid-A-disaccharide synthase |
|---|
| Protein accession | YP_719570 |
|---|
| Protein GI | 113461501 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0763] Lipid A disaccharide synthetase |
|---|
| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.239828 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGATA AAAAAAATAT AACAATTGGC ATTGTCGCAG GCGAAGTATC CGGTGATATT
CTCGGTGCAG GTCTTATTCG AGCGTTAAAA ATACAATATC CACAGGCACG TTTTATTGGG
ATTGCTGGTA AAAACATGTT GGCTGAGGGG TGTAAAACGT TAGTTGATAT GGAAGAAATT
GCTGTCATGG GGTTGGTAGA AGTAATAAAG TATTTGCCTC GTTTGCTGAA AATTCGTCGT
TTAGTCATTG ATACTATGTT AGCGGAAAAG CCTGATATTT TTATTGGCAT TGATGCACCG
GATTTTAATT TGGATATAGA GTTAAAACTC AAAAAGCAAG GCATTAAGAC GCTTCATTAT
GTCAGCCCTT CTGTTTGGGC TTGGCGACAA AAGCGTATTG TTAAAATTGC TCAGGCAACG
AATTTGGTAC TGGCTTTTTT GCCTTTTGAA AAAGCATTTT ATGATCGTTT TAATGTGCCT
TGTCGCTTTG TCGGGCATAC TATGGCGGAC ATCATCGATT TGCAACCGGA TCGCCAAGAT
GCTTGCTTCC AACTTAATCT GGAGCCAAAA CATCGTTATG TGGCTATTTT AGTTGGAAGT
CGAGAGGCAG AGGTTCAATT TTTAACTCCC CCCTTTTTAC AAACGGCACA ATTAATCAAG
CAGCGTTTTC CCGATGTTCA ATTTTTAGTG CCTTTGGTAA ATGAAAAAAG ACGTAAACAG
TTTGAACAAA TTAAAGCCCA AATTGCACCG CATTTAGAGG TCGTTTTTCT AGATGGGCAG
GCACGCCAAG CGATGATTGT TGCTGAGGCT AGTTTACTTG CCTCTGGTAC AGCGTCTTTA
GAATGTATGC TATGTAAATC GCCAATGGTA GTGGGTTATA AAATGAAACC TTTTACTTAC
TTTCTTGCAA AGCGTTTAGT TAAAACAAAA TATATTTCGT TACCAAATTT ATTAGCAGAT
GACATGTTAG TGCCTGAAAT GATTCAAGAG GATTGTACTG CTGAGAAATT AGCTGAAAAA
TTATCTGTTT ATTTGGAGCA AACGGAAAGT GGGATTAAAA ATCGCCAACA TTTAATTCAA
CAATTTACTC AATTACATCA ACTGATTCGA TGCAATGCTG ATAAACAGGC GGCACAAGCA
GTTATTGATT TATTAAATGA TGAGGTATAA
|
|---|
| Protein sequence | MIDKKNITIG IVAGEVSGDI LGAGLIRALK IQYPQARFIG IAGKNMLAEG CKTLVDMEEI
AVMGLVEVIK YLPRLLKIRR LVIDTMLAEK PDIFIGIDAP DFNLDIELKL KKQGIKTLHY
VSPSVWAWRQ KRIVKIAQAT NLVLAFLPFE KAFYDRFNVP CRFVGHTMAD IIDLQPDRQD
ACFQLNLEPK HRYVAILVGS REAEVQFLTP PFLQTAQLIK QRFPDVQFLV PLVNEKRRKQ
FEQIKAQIAP HLEVVFLDGQ ARQAMIVAEA SLLASGTASL ECMLCKSPMV VGYKMKPFTY
FLAKRLVKTK YISLPNLLAD DMLVPEMIQE DCTAEKLAEK LSVYLEQTES GIKNRQHLIQ
QFTQLHQLIR CNADKQAAQA VIDLLNDEV
|
|---|
| |