Gene HS_1354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1354 
Symbol 
ID4240869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1548092 
End bp1549144 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content32% 
IMG OID638104931 
Productpermease 
Protein accessionYP_719566 
Protein GI113461497 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAA GAAATTCATC GCTAACTCAA GTGCTGGTTG CTTGTGCTGC AATTATCGTT 
ATTTTAGGTG GCATTAAACT CGCCAGTGAG ATTGTTGTGC CATTTCTATT ATCGTTATTT
ATTGCGATTA TTTGCTCACC TGTGGTGAAT TTTATGACTA AACGGAAAAT ACCTCATTGG
CTTGCGATTA CTTTGCTTTT TGTATTAATT GTGGTGTTAT TTTATTTTTT AGCCAGTTTA
ATTAGTAATA CTGTTCAGGA GTTTACTCAA TCTATTCCTC AATACAAGGT ACTGTTATCA
CAACGTTTAA ATGATTTGTT AGCTTTTGCT CATCATTTTA ATATTCCTTT ATTTTTTTCT
ACCGATAGTA TTAATGATGA TTTTGATCCT AGCATTATCA TGAAATTTGT CAGTCGTTTT
TTGTTGAGCT TCTCGAATGT GGTAACAAAT ATTTTTGTGT TGTTTTTGAT AGTTGTCTTT
ATGCTTGCTG AAGCACCTAC TGTAAAGCAA AAATTTACTA AATTAATCGT TACTGAAAAT
ACTGTTACTC AACAAAATTA TATTGAACGT ATTCTACAAG GCGTTATCGG CTATTTAGGC
GTAAAAACGA TTACTAGTGT GATGACAGGA TTGTGCATTT ACTTTGTTTT ATCCGTCCTT
GATATTCAAT ATGCTATTTT ATGGGCTACC TTGGTCTTCT TATTGAATTA TATTCCTAAT
ATAGGATCTA TCATTGCGGC AGTCCCTGTT ATTGTGCAAA GTTTTTTATT AAATGGATTT
ATCACGGGTT TAGTTGTCAG TATTGCATTT ATTCTGATTA ATACTGTGGT TGGTAACGTT
TTAGAACCTA AGATGATGGG CAGAAAATTG GGACTATCGA CTTTAATTGT TTTTCTGTCA
CTTTTATTTT GGGGTTGGTT ATTAGGAACA GTAGGAATGT TGCTTTCAGT TCCTCTAACA
ATGGGATTAA AAATTGCATT AGAGGCAAGT CCAAATACAA TCAAATATGC TGAGTTATTA
GGTGATGTAA GTGATGTGCA AAATGTTAAA TGA
 
Protein sequence
MSERNSSLTQ VLVACAAIIV ILGGIKLASE IVVPFLLSLF IAIICSPVVN FMTKRKIPHW 
LAITLLFVLI VVLFYFLASL ISNTVQEFTQ SIPQYKVLLS QRLNDLLAFA HHFNIPLFFS
TDSINDDFDP SIIMKFVSRF LLSFSNVVTN IFVLFLIVVF MLAEAPTVKQ KFTKLIVTEN
TVTQQNYIER ILQGVIGYLG VKTITSVMTG LCIYFVLSVL DIQYAILWAT LVFLLNYIPN
IGSIIAAVPV IVQSFLLNGF ITGLVVSIAF ILINTVVGNV LEPKMMGRKL GLSTLIVFLS
LLFWGWLLGT VGMLLSVPLT MGLKIALEAS PNTIKYAELL GDVSDVQNVK