Gene HS_1341 details

Gene Information

• Locus tag: HS_1341
• Symbol: upp
• ID: 4240853
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 1533632
• End bp: 1534258
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 638104915
• Product: uracil phosphoribosyltransferase
• Protein accession: YP_719553
• Protein GI: 113461484
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0035] Uracil phosphoribosyltransferase
• TIGRFAM ID: [TIGR01091] uracil phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.281958
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATTG TTGAAGTTAA ACATCCACTA GTAAAACATA AACTAGGTTT GATGCGAGTT 
GCGGATATTA CTACAAAAGA TTTCCGTGAA TTAGCCACTG AAGTGGGAAG CCTGTTGACT 
TATGAAGCCA CATCAGATTT AGAAACTGAA AAAGTGATAA TTGATGGTTG GTGTGGTGCT 
GTTGAAATTG ATCGAATTAA GGGTAAAAAA GTCACTGTCG TTCCTATTCT TCGTGCCGGA 
TTAGGTATGA TGGACGGCGT ATTGGAACAT GTTCCAAGTG CCCGCATCAG TGTAGTGGGT 
ATGTATCGTG ATGAAGAAAC TCTAGAACCA GTTCCTTATT TTCAAAAATT AGCAAGTGAT 
TTAGATGAAC GCTTAGCAAT TGTTGTTGAT CCTATGTTAG CCACTGGGGG GTCTATGATT 
GCGACTATTA ATTTATTAAA AGCAAAAGGT TGTCAGCATA TTAAAGTCCT AGTCTTAGTT 
GCTGCACCTG AAGGGATCAA AGCTTTAGAG GCTGTACATC CTGATGTTGA ATTATATACT 
GCATCAATTG ACAGCCATTT AAATGAGCAT GGCTACATTA TCCCAGGATT GGGTGATGCA 
GGTGATAAGA TTTTTGGTAC GAAATAA 

 

Protein sequence

MKIVEVKHPL VKHKLGLMRV ADITTKDFRE LATEVGSLLT YEATSDLETE KVIIDGWCGA 
VEIDRIKGKK VTVVPILRAG LGMMDGVLEH VPSARISVVG MYRDEETLEP VPYFQKLASD 
LDERLAIVVD PMLATGGSMI ATINLLKAKG CQHIKVLVLV AAPEGIKALE AVHPDVELYT 
ASIDSHLNEH GYIIPGLGDA GDKIFGTK