| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1340 |
|---|
| Symbol | |
|---|
| ID | 4240852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | + |
|---|
| Start bp | 1532664 |
|---|
| End bp | 1533491 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638104914 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_719552 |
|---|
| Protein GI | 113461483 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0121] Predicted glutamine amidotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTCAAC TTTTAGGAAT GAATTGTAAT ACCCCAACAG ATATTGTTTT TTCGTTTGAG
GGATTTCGTC GAAGAGCAGG ATTAACTAAT TGTCATTCCG ATGGTTTCGG AATTGCCTTT
TTTGAGGGAA AAGGAATTCG TGTTTTTCGC GACAATCGTC CCGGACATTC TTCTCCCATT
GCTGATTGTA TTAAACAATA CAACATAAAA TCTTTAAATG TTGTTGCACA TATTCGTAAA
GCAACACAAG GAGAAGTCAA TATTGAAAAT ACTCACCCTT TTATTCGTGA ACTTTGGGGA
GAAAATTGGG TTTTTGCTCA TAATGGCAAC TTAAATTCAT TACCCGATAT GACAGAAAGT
CTTTTTCAAC CGATAGGCTC GACGGATTCC GAAACAGCAT TTTGTTATAT GCTTAGCCAA
CTAAAGAAAC GTTTTCCCAA AAAGCCTAAT GAACAAGATA TGTTTAGTGC AATTCAAAAA
CTCACACAAG AATTAACACA GAGAGGCACA TTTAATTTTA TCCTATCTAA TGGTGAGTGG
ATGATAGCCC ACTGTTCAAC AAATTTACAC TATCTCACTC GTAAGGCACC TTTCGGAAAA
GCACAACGCA TAGACGATGA TAATATTATT GATTTTCGTG ACTATGCAAA AGAAACAGAT
AAAGTAACAA TTATTACAAC GTTCCCACTT ACCAAAGATG AACATTGGAA TAAAATGGAA
TCTGGCGGTT TTGTGATGTT TAAAGAAGGT GATAAAGTAG CAGAAATCTT AGGCATAGCG
TCTGAAATTA TTGATGACGG CACTCTAGGC ATGCAACAGT TTGCCTAA
|
|---|
| Protein sequence | MCQLLGMNCN TPTDIVFSFE GFRRRAGLTN CHSDGFGIAF FEGKGIRVFR DNRPGHSSPI
ADCIKQYNIK SLNVVAHIRK ATQGEVNIEN THPFIRELWG ENWVFAHNGN LNSLPDMTES
LFQPIGSTDS ETAFCYMLSQ LKKRFPKKPN EQDMFSAIQK LTQELTQRGT FNFILSNGEW
MIAHCSTNLH YLTRKAPFGK AQRIDDDNII DFRDYAKETD KVTIITTFPL TKDEHWNKME
SGGFVMFKEG DKVAEILGIA SEIIDDGTLG MQQFA
|
|---|
| |